Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17e18
         (218 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   2.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   2.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   3.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           20   3.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   3.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   4.0  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   5.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    19   6.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   6.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    19   6.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   6.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   9.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   9.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    19   9.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   9.2  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 20.6 bits (41), Expect = 2.3
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -1

Query: 74  QSQRI-HYYFFPNYSAGLYDI 15
           +S RI H YF P+  AG Y+I
Sbjct: 226 RSWRITHSYFMPDPLAGDYNI 246


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 2.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 80  PLQSQRIHYYFFPNYSAG 27
           P ++   HYY F  +SAG
Sbjct: 467 PEKTANRHYYAFVPFSAG 484


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 3.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 62  IHYYFFPNYSAGLY 21
           +HY++    SAGL+
Sbjct: 215 VHYHYLSPLSAGLF 228


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.2 bits (40), Expect = 3.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 62  IHYYFFPNYSAGLY 21
           +HY++    SAGL+
Sbjct: 86  VHYHYLSPLSAGLF 99


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 3.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 62  IHYYFFPNYSAGLY 21
           +HY++    SAGL+
Sbjct: 215 VHYHYLSPLSAGLF 228


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 87  CPTPPIAT 64
           CP+PP+ T
Sbjct: 618 CPSPPVTT 625


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.4 bits (38), Expect = 5.3
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -1

Query: 59  HYYFFPNYSAGLYDI 15
           H++F+P+  A  Y++
Sbjct: 350 HHFFYPDPLASKYEL 364


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 143 ELTLYMSVGSGNHLTPXGL 199
           E  L  ++ SGN +TP G+
Sbjct: 347 EKRLRDAIDSGNVITPQGV 365


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +1

Query: 70  DWRGGTAVLTTILRSXNSYL 129
           DW   T    T+L S N  +
Sbjct: 221 DWSSKTETNATVLHSINKVI 240


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 8/31 (25%), Positives = 10/31 (32%)
 Frame = +3

Query: 81  WDSRFNYYIKILXLXSQGGWRN*XCTCLWAP 173
           WDS +        +    GWR       W P
Sbjct: 200 WDSDYTDKSNEKKIPKSSGWRKLRNIVHWTP 230


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 92  TAVPPLQSQRIHYYFFPNYSA 30
           +A P    +   YY  P+Y A
Sbjct: 397 SATPVFHQEMALYYLKPSYDA 417


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 88  AVLTTILRSXNSYLKXGGGINXVHVCGL 171
           AV   ++    +YL  G  I  +H+C L
Sbjct: 84  AVAILVMPFNVAYLLLGKWIFGIHLCKL 111


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 88  AVLTTILRSXNSYLKXGGGINXVHVCGL 171
           AV   ++    +YL  G  I  +H+C L
Sbjct: 84  AVAILVMPFNVAYLLLGKWIFGIHLCKL 111


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 88  AVLTTILRSXNSYLKXGGGINXVHVCGLRXPL 183
           +VLT +  S   YL     +    + GL+ P+
Sbjct: 128 SVLTIVAFSMERYLAICHPLRVYTISGLKRPI 159


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 88  AVLTTILRSXNSYLKXGGGINXVHVCGL 171
           AV   ++    +YL  G  I  +H+C L
Sbjct: 84  AVAILVMPFNVAYLLLGKWIFGIHLCKL 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,983
Number of Sequences: 438
Number of extensions: 966
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3281070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)