Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17e16
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY496232-1|AAS77218.1| 211|Homo sapiens truncated alpha-1,4-gal... 31 3.8
X80818-1|CAA56784.1| 912|Homo sapiens metabotropic glutamate re... 31 5.0
U92457-1|AAB51762.1| 912|Homo sapiens metabotropic glutamate re... 31 5.0
BC130528-1|AAI30529.1| 912|Homo sapiens glutamate receptor, met... 31 5.0
BC130526-1|AAI30527.1| 912|Homo sapiens glutamate receptor, met... 31 5.0
AL590403-1|CAI17348.1| 912|Homo sapiens glutamate receptor, met... 31 5.0
AK131536-1|BAD18673.1| 796|Homo sapiens protein ( Homo sapiens ... 31 5.0
AJ012737-1|CAB46442.1| 2692|Homo sapiens filamin, muscle isoform... 30 6.7
AF252549-1|AAF67190.1| 2725|Homo sapiens gamma-filamin protein. 30 6.7
AF184126-1|AAF68195.1| 2705|Homo sapiens filamin 2 protein. 30 6.7
AF146692-1|AAF80245.1| 2691|Homo sapiens filamin 2 protein. 30 6.7
AF089841-1|AAD12245.1| 2705|Homo sapiens gamma-filamin protein. 30 6.7
AB208865-1|BAD92102.1| 1342|Homo sapiens gamma filamin variant p... 30 6.7
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 30 8.8
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 30 8.8
BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein. 30 8.8
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 30 8.8
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 30 8.8
AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein. 30 8.8
>AY496232-1|AAS77218.1| 211|Homo sapiens truncated
alpha-1,4-galactosyltransferase protein.
Length = 211
Score = 31.1 bits (67), Expect = 3.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 454 TCSTCWGVWV*GWRRGTRPSPLG 386
TC TCW W G GT P P G
Sbjct: 144 TCWTCWNSWTCGSCSGTHPWPTG 166
>X80818-1|CAA56784.1| 912|Homo sapiens metabotropic glutamate
receptor type 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 469 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 368
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>U92457-1|AAB51762.1| 912|Homo sapiens metabotropic glutamate
receptor 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 469 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 368
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>BC130528-1|AAI30529.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 469 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 368
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>BC130526-1|AAI30527.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 469 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 368
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>AL590403-1|CAI17348.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 469 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 368
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>AK131536-1|BAD18673.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ16766 fis, clone BRAWH3013197, highly similar
to Metabotropic glutamate receptor 4 precursor. ).
Length = 796
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 469 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 368
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 435 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 469
>AJ012737-1|CAB46442.1| 2692|Homo sapiens filamin, muscle isoform
protein.
Length = 2692
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 526 SYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTPSFT 681
++VG N + + +K G ++ +H T E +VK HMG + ++T
Sbjct: 2615 AFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVK--HMGNRVYNVTYT 2664
>AF252549-1|AAF67190.1| 2725|Homo sapiens gamma-filamin protein.
Length = 2725
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 526 SYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTPSFT 681
++VG N + + +K G ++ +H T E +VK HMG + ++T
Sbjct: 2648 AFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVK--HMGNRVYNVTYT 2697
>AF184126-1|AAF68195.1| 2705|Homo sapiens filamin 2 protein.
Length = 2705
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 526 SYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTPSFT 681
++VG N + + +K G ++ +H T E +VK HMG + ++T
Sbjct: 2628 AFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVK--HMGNRVYNVTYT 2677
>AF146692-1|AAF80245.1| 2691|Homo sapiens filamin 2 protein.
Length = 2691
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 526 SYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTPSFT 681
++VG N + + +K G ++ +H T E +VK HMG + ++T
Sbjct: 2614 AFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVK--HMGNRVYNVTYT 2663
>AF089841-1|AAD12245.1| 2705|Homo sapiens gamma-filamin protein.
Length = 2705
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 526 SYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTPSFT 681
++VG N + + +K G ++ +H T E +VK HMG + ++T
Sbjct: 2628 AFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVK--HMGNRVYNVTYT 2677
>AB208865-1|BAD92102.1| 1342|Homo sapiens gamma filamin variant
protein.
Length = 1342
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 526 SYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTPSFT 681
++VG N + + +K G ++ +H T E +VK HMG + ++T
Sbjct: 1265 AFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVK--HMGNRVYNVTYT 1314
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTP 672
R VE +V +N I L KKGGGC +MN + F+ V R M ++L P
Sbjct: 383 RTVEVDFVDINVGCPIDLVYKKGGGCALMN----RSTKFQQIV--RGMNQVLDVP 431
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTP 672
R VE +V +N I L KKGGGC +MN + F+ V R M ++L P
Sbjct: 346 RTVEVDFVDINVGCPIDLVYKKGGGCALMN----RSTKFQQIV--RGMNQVLDVP 394
>BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein.
Length = 408
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTP 672
R VE +V +N I L KKGGGC +MN + F+ V R M ++L P
Sbjct: 141 RTVEVDFVDINVGCPIDLVYKKGGGCALMN----RSTKFQQIV--RGMNQVLDVP 189
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTP 672
R VE +V +N I L KKGGGC +MN + F+ V R M ++L P
Sbjct: 366 RTVEVDFVDINVGCPIDLVYKKGGGCALMN----RSTKFQQIV--RGMNQVLDVP 414
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTP 672
R VE +V +N I L KKGGGC +MN + F+ V R M ++L P
Sbjct: 383 RTVEVDFVDINVGCPIDLVYKKGGGCALMN----RSTKFQQIV--RGMNQVLDVP 431
>AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein.
Length = 223
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEYTNSFESFVKPRHMGELLQTP 672
R VE +V +N I L KKGGGC +MN + F+ V R M ++L P
Sbjct: 7 RTVEVDFVDINVGCPIDLVYKKGGGCALMN----RSTKFQQIV--RGMNQVLDVP 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,948,221
Number of Sequences: 237096
Number of extensions: 2484474
Number of successful extensions: 5809
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5808
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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