BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17e09
(628 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein. 23 7.9
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 23 7.9
>EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein.
Length = 661
Score = 23.0 bits (47), Expect = 7.9
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 50 RVCHFSYNSVYFNLFG 3
R+CHFS+ ++++ G
Sbjct: 60 RICHFSWTMEHYHVMG 75
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 23.0 bits (47), Expect = 7.9
Identities = 10/44 (22%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 27 IIRKMANTSNITPDIIVNAQINSEDENVLDFIIEDEY-YLKKTG 155
I+ + S++TP+ + +++ NV+ ++ + +Y YL+ G
Sbjct: 343 ILGDVVEASSLTPNAQLYGSLHNMGHNVIAYVHDPDYRYLEDYG 386
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,611
Number of Sequences: 2352
Number of extensions: 8312
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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