Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17e06
(496 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC... 207 7e-54
AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA... 207 7e-54
AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB... 198 3e-51
BT004880-1|AAO45236.1| 348|Drosophila melanogaster GH14121p pro... 32 0.49
AE014297-786|AAF54268.1| 348|Drosophila melanogaster CG8043-PA ... 32 0.49
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro... 31 0.65
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P... 31 0.65
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P... 31 0.65
>AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC,
isoform C protein.
Length = 155
Score = 207 bits (505), Expect = 7e-54
Identities = 97/119 (81%), Positives = 108/119 (90%)
Frame = +1
Query: 70 GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTI 249
G K+K +R ++VGLGFKTPREAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTI
Sbjct: 24 GITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTI 83
Query: 250 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 426
VIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 84 VIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA,
isoform A protein.
Length = 155
Score = 207 bits (505), Expect = 7e-54
Identities = 97/119 (81%), Positives = 108/119 (90%)
Frame = +1
Query: 70 GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTI 249
G K+K +R ++VGLGFKTPREAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTI
Sbjct: 24 GITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTI 83
Query: 250 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 426
VIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 84 VIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB,
isoform B protein.
Length = 154
Score = 198 bits (483), Expect = 3e-51
Identities = 91/115 (79%), Positives = 103/115 (89%)
Frame = +1
Query: 82 RKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRR 261
+K R ++ +GLGF+ P EAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVIRR
Sbjct: 27 KKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRR 86
Query: 262 DYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 426
DYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 87 DYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141
>BT004880-1|AAO45236.1| 348|Drosophila melanogaster GH14121p
protein.
Length = 348
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 330 QMHGHIPVPFLEPIVFG*VVKVIAADHDSSLHLHFLNDAG 211
++HG VPFL+ + V ++ + +S++ HFLN AG
Sbjct: 50 RVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAG 89
>AE014297-786|AAF54268.1| 348|Drosophila melanogaster CG8043-PA
protein.
Length = 348
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 330 QMHGHIPVPFLEPIVFG*VVKVIAADHDSSLHLHFLNDAG 211
++HG VPFL+ + V ++ + +S++ HFLN AG
Sbjct: 50 RVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAG 89
>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 190 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 330
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
isoform B protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 190 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 330
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
isoform A protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 190 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 330
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,340,565
Number of Sequences: 53049
Number of extensions: 434237
Number of successful extensions: 1221
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -