Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17d18
(375 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113408-1|AAI13409.1| 1115|Homo sapiens syntaxin binding protei... 29 6.5
BC113382-1|AAI13383.1| 1115|Homo sapiens syntaxin binding protei... 29 6.5
BC037988-1|AAH37988.1| 904|Homo sapiens MICAL-like 2 protein. 29 6.5
AL590709-5|CAI40741.1| 1115|Homo sapiens syntaxin binding protei... 29 6.5
AL590709-4|CAI40740.1| 1151|Homo sapiens syntaxin binding protei... 29 6.5
AL590709-3|CAI40739.1| 1098|Homo sapiens syntaxin binding protei... 29 6.5
AL590709-2|CAI40738.1| 264|Homo sapiens syntaxin binding protei... 29 6.5
AL356415-3|CAI20240.1| 1115|Homo sapiens syntaxin binding protei... 29 6.5
AL356415-2|CAI20241.1| 1151|Homo sapiens syntaxin binding protei... 29 6.5
AL356415-1|CAI20239.1| 1098|Homo sapiens syntaxin binding protei... 29 6.5
AL355365-6|CAI40425.1| 1115|Homo sapiens syntaxin binding protei... 29 6.5
AL355365-5|CAI40424.1| 1151|Homo sapiens syntaxin binding protei... 29 6.5
AL355365-4|CAI40423.1| 1098|Homo sapiens syntaxin binding protei... 29 6.5
AL355365-2|CAI40421.1| 264|Homo sapiens syntaxin binding protei... 29 6.5
AK126808-1|BAC86702.1| 493|Homo sapiens protein ( Homo sapiens ... 29 6.5
AK090549-1|BAC03475.1| 637|Homo sapiens protein ( Homo sapiens ... 29 6.5
AK055484-1|BAB70930.1| 398|Homo sapiens protein ( Homo sapiens ... 29 6.5
AK027124-1|BAB15667.1| 704|Homo sapiens protein ( Homo sapiens ... 29 6.5
AB073398-1|BAE45727.1| 786|Homo sapiens putative protein produc... 29 6.5
BC128152-1|AAI28153.1| 446|Homo sapiens AGBL1 protein protein. 28 8.6
BC052240-1|AAH52240.1| 403|Homo sapiens zinc finger, HIT type 2... 28 8.6
BC038089-1|AAH38089.1| 174|Homo sapiens ZNHIT2 protein protein. 28 8.6
BC029825-1|AAH29825.1| 177|Homo sapiens ZNHIT2 protein protein. 28 8.6
AK223358-1|BAD97078.1| 403|Homo sapiens zinc finger, HIT domain... 28 8.6
AK223333-1|BAD97053.1| 403|Homo sapiens zinc finger, HIT domain... 28 8.6
AK056872-1|BAB71299.1| 478|Homo sapiens protein ( Homo sapiens ... 28 8.6
AF119497-1|AAF23591.1| 403|Homo sapiens C11orf5 protein. 28 8.6
>BC113408-1|AAI13409.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 842 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 898
>BC113382-1|AAI13383.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 842 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 898
>BC037988-1|AAH37988.1| 904|Homo sapiens MICAL-like 2 protein.
Length = 904
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 101 SPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWK 211
SP R R L+ P + + W R PG+ R+Q WK
Sbjct: 660 SPPRRRRLAVPASLDVCDNWLR-PEPPGQEARVQSWK 695
>AL590709-5|CAI40741.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 842 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 898
>AL590709-4|CAI40740.1| 1151|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1151
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 878 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 934
>AL590709-3|CAI40739.1| 1098|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1098
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 825 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 881
>AL590709-2|CAI40738.1| 264|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 264
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 202 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 258
>AL356415-3|CAI20240.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 842 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 898
>AL356415-2|CAI20241.1| 1151|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1151
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 878 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 934
>AL356415-1|CAI20239.1| 1098|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1098
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 825 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 881
>AL355365-6|CAI40425.1| 1115|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 842 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 898
>AL355365-5|CAI40424.1| 1151|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1151
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 878 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 934
>AL355365-4|CAI40423.1| 1098|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 1098
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 825 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 881
>AL355365-2|CAI40421.1| 264|Homo sapiens syntaxin binding protein 5
(tomosyn) protein.
Length = 264
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 202 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 258
>AK126808-1|BAC86702.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ44858 fis, clone BRALZ2003119. ).
Length = 493
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 101 SPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWK 211
SP R R L+ P + + W R PG+ R+Q WK
Sbjct: 249 SPPRRRRLAVPASLDVCDNWLR-PEPPGQEARVQSWK 284
>AK090549-1|BAC03475.1| 637|Homo sapiens protein ( Homo sapiens
cDNA FLJ33230 fis, clone ASTRO2001458, highly similar to
Rattus norvegicus b-tomosyn isoform mRNA. ).
Length = 637
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 364 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 420
>AK055484-1|BAB70930.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ30922 fis, clone FEBRA2006485, highly similar to
Rattus norvegicus m-tomosyn mRNA. ).
Length = 398
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 125 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 181
>AK027124-1|BAB15667.1| 704|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23471 fis, clone HSI11969. ).
Length = 704
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 101 SPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWK 211
SP R R L+ P + + W R PG+ R+Q WK
Sbjct: 460 SPPRRRRLAVPASLDVCDNWLR-PEPPGQEARVQSWK 495
>AB073398-1|BAE45727.1| 786|Homo sapiens putative protein product
of Nbla04300 protein.
Length = 786
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 161 WRYKNHPGRSTRLQRWKSRSCLYTADPSRTVTGSMNNLRLDCAET*NLTVALPTR*CA 334
WR N P ++ K R + + PS + S N + C+E ++LPT+ CA
Sbjct: 513 WREHNVPEEKDEKEKLKKRRPV-SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCA 569
>BC128152-1|AAI28153.1| 446|Homo sapiens AGBL1 protein protein.
Length = 446
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 107 VRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWKSRSCLYT 232
V++ +L P +R YKNH +ST + S C YT
Sbjct: 324 VKEALLGKPTWIRTGHEICYYKNHYRQSTAVAGRASGKCYYT 365
>BC052240-1|AAH52240.1| 403|Homo sapiens zinc finger, HIT type 2
protein.
Length = 403
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 47 SRMLETRQNLRLRRKCEASPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWKSR 217
SR+ + LR +R+ E P + S P P L+ W R PG +R SR
Sbjct: 62 SRLASALRRLRQQRETEDEPGEAGLSSGPAPGGLSGLWERLA--PGEKAAFERLLSR 116
>BC038089-1|AAH38089.1| 174|Homo sapiens ZNHIT2 protein protein.
Length = 174
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 47 SRMLETRQNLRLRRKCEASPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWKSR 217
SR+ + LR +R+ E P + S P P L+ W R PG +R SR
Sbjct: 62 SRLASALRRLRQQRETEDEPGEAGLSSGPAPGGLSGLWERLA--PGEKAAFERLLSR 116
>BC029825-1|AAH29825.1| 177|Homo sapiens ZNHIT2 protein protein.
Length = 177
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 47 SRMLETRQNLRLRRKCEASPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWKSR 217
SR+ + LR +R+ E P + S P P L+ W R PG +R SR
Sbjct: 62 SRLASALRRLRQQRETEDEPGEAGLSSGPAPGGLSGLWERLA--PGEKAAFERLLSR 116
>AK223358-1|BAD97078.1| 403|Homo sapiens zinc finger, HIT domain
containing 2 variant protein.
Length = 403
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 47 SRMLETRQNLRLRRKCEASPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWKSR 217
SR+ + LR +R+ E P + S P P L+ W R PG +R SR
Sbjct: 62 SRLASALRRLRQQRETEDEPGEAGLSSGPAPGGLSGLWERLA--PGEKAAFERLLSR 116
>AK223333-1|BAD97053.1| 403|Homo sapiens zinc finger, HIT domain
containing 2 variant protein.
Length = 403
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 47 SRMLETRQNLRLRRKCEASPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWKSR 217
SR+ + LR +R+ E P + S P P L+ W R PG +R SR
Sbjct: 62 SRLASALRRLRQQRETEDEPGEAGLSSGPAPGGLSGLWERLA--PGEKAAFERLLSR 116
>AK056872-1|BAB71299.1| 478|Homo sapiens protein ( Homo sapiens
cDNA FLJ32310 fis, clone PROST2003102. ).
Length = 478
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 107 VRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWKSRSCLYT 232
V++ +L P +R YKNH +ST + S C YT
Sbjct: 356 VKEDLLGKPTWIRTGHEICYYKNHYRQSTAVAGGASGKCYYT 397
>AF119497-1|AAF23591.1| 403|Homo sapiens C11orf5 protein.
Length = 403
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 47 SRMLETRQNLRLRRKCEASPVRDRILSSPEPVRLAKRWWRYKNHPGRSTRLQRWKSR 217
SR+ + LR +R+ E P + S P P L+ W R PG +R SR
Sbjct: 62 SRLASALRRLRQQRETEDEPGEAGLSSGPAPGGLSGLWERLA--PGEKAAFERLLSR 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,377,336
Number of Sequences: 237096
Number of extensions: 1178832
Number of successful extensions: 3307
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3307
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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