Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17d17
         (632 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M30825-1|AAF97987.1|  853|Drosophila melanogaster ovarian tumor ...    30   2.3  
AE014298-1191|AAS65286.1|  853|Drosophila melanogaster CG12743-P...    30   2.3  
AE014298-1190|AAN09234.1|  853|Drosophila melanogaster CG12743-P...    30   2.3  
BT025952-1|ABG02196.1|   93|Drosophila melanogaster IP15265p pro...    28   9.1  
AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-P...    28   9.1  
AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,...    28   9.1  
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,...    28   9.1  

>M30825-1|AAF97987.1|  853|Drosophila melanogaster ovarian tumor
           protein isoform protein.
          Length = 853

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 460 YRYRLIAIRCRTLVPNATRSYFCHQQQRFPSKGLTHVHLSTL 585
           Y ++ +  +C+  +PN T  Y CH Q     K   HV +  +
Sbjct: 335 YNFK-VGAKCKVELPNETEMYTCHVQNISKDKNYCHVFVERI 375


>AE014298-1191|AAS65286.1|  853|Drosophila melanogaster CG12743-PC,
           isoform C protein.
          Length = 853

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 460 YRYRLIAIRCRTLVPNATRSYFCHQQQRFPSKGLTHVHLSTL 585
           Y ++ +  +C+  +PN T  Y CH Q     K   HV +  +
Sbjct: 335 YNFK-VGAKCKVELPNETEMYTCHVQNISKDKNYCHVFVERI 375


>AE014298-1190|AAN09234.1|  853|Drosophila melanogaster CG12743-PB,
           isoform B protein.
          Length = 853

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 460 YRYRLIAIRCRTLVPNATRSYFCHQQQRFPSKGLTHVHLSTL 585
           Y ++ +  +C+  +PN T  Y CH Q     K   HV +  +
Sbjct: 335 YNFK-VGAKCKVELPNETEMYTCHVQNISKDKNYCHVFVERI 375


>BT025952-1|ABG02196.1|   93|Drosophila melanogaster IP15265p
           protein.
          Length = 93

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 357 RARHLRRRMSPGIVPWNRCLE-HNYTREIVRLMTTLPVPSNRNTLSHS 497
           R+R    R S   +P N  L+ ++  +E  + +T LP+PSN  ++S S
Sbjct: 27  RSRSRSERASSLALPLNSLLDFYDKQQERCKSVTLLPLPSNSGSISES 74


>AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-PA
           protein.
          Length = 214

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 462 PVPSNRNTLSHSCTERHAQLFLPPAATVSVEGA 560
           P PS+ NT SHS ++ +A    PP  T ++  A
Sbjct: 135 PNPSSHNTNSHSSSQANANANPPPNTTNNITAA 167


>AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,
           isoform A protein.
          Length = 1379

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 357 RARHLRRRMSPGIVPWNRCLE-HNYTREIVRLMTTLPVPSNRNTLSHS 497
           R+R    R S   +P N  L+ ++  +E  + +T LP+PSN  ++S S
Sbjct: 27  RSRSRSERASSLALPLNSLLDFYDKQQEQCKSVTLLPLPSNSGSISES 74


>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
           isoform B protein.
          Length = 1397

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 357 RARHLRRRMSPGIVPWNRCLE-HNYTREIVRLMTTLPVPSNRNTLSHS 497
           R+R    R S   +P N  L+ ++  +E  + +T LP+PSN  ++S S
Sbjct: 27  RSRSRSERASSLALPLNSLLDFYDKQQEQCKSVTLLPLPSNSGSISES 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,850,984
Number of Sequences: 53049
Number of extensions: 552358
Number of successful extensions: 1984
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)