Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17d08
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341150-1|AAR13714.1|  164|Anopheles gambiae aminopeptidase N p...    24   3.3  
AY341148-1|AAR13712.1|  164|Anopheles gambiae aminopeptidase N p...    24   3.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   5.8  

>AY341150-1|AAR13714.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 203 RV*WLPITYPISSKFITI*KLKFLLNRRT 117
           R  W+PITY +   F T+   +F + + T
Sbjct: 73  RTWWIPITYHVHQSFGTVQSQQFWMPQGT 101


>AY341148-1|AAR13712.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 203 RV*WLPITYPISSKFITI*KLKFLLNRRT 117
           R  W+PITY +   F T+   +F + + T
Sbjct: 73  RTWWIPITYHVHQSFGTVQSQQFWMPQGT 101


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 293 YLPETSITINFNKMSKLGALHITKHSGA 376
           Y  +T+ +  + K+S  G    T HSGA
Sbjct: 619 YREDTTGSYKYGKLSSSGGASSTTHSGA 646


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,459
Number of Sequences: 2352
Number of extensions: 11096
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)