Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17d08
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102661-1|AAM27490.1|  235|Drosophila melanogaster GH11067p pro...    94   2e-19
AE014297-1212|AAF54564.1|  235|Drosophila melanogaster CG6567-PA...    94   2e-19
AY094672-1|AAM11025.1|  216|Drosophila melanogaster GH04560p pro...    48   1e-05
AE014296-1993|AAS65031.1|  216|Drosophila melanogaster CG18815-P...    48   1e-05
AE014296-1992|AAS65030.1|  216|Drosophila melanogaster CG18815-P...    48   1e-05
AE014296-1991|AAG22322.1|  216|Drosophila melanogaster CG18815-P...    48   1e-05

>AY102661-1|AAM27490.1|  235|Drosophila melanogaster GH11067p
           protein.
          Length = 235

 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
 Frame = +2

Query: 359 TKHSGAKQTATVIFFHGSGSTGADIKEWVRLMV-EQFSFPHVKVLFPTAPLQPYTPAGGM 535
           T ++  K TA+VIFFHGSG TG ++ EWVR ++     +PH+K+++PTAP Q YTP  G 
Sbjct: 7   TVNATGKHTASVIFFHGSGDTGPNVLEWVRFLIGRNLEYPHIKIIYPTAPKQKYTPLDGE 66

Query: 536 MSNVWFDRANITPDVPEKLDSLA 604
           +SNVWFDR ++     E   S++
Sbjct: 67  LSNVWFDRKSVNIAASESKKSMS 89


>AE014297-1212|AAF54564.1|  235|Drosophila melanogaster CG6567-PA
           protein.
          Length = 235

 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
 Frame = +2

Query: 359 TKHSGAKQTATVIFFHGSGSTGADIKEWVRLMV-EQFSFPHVKVLFPTAPLQPYTPAGGM 535
           T ++  K TA+VIFFHGSG TG ++ EWVR ++     +PH+K+++PTAP Q YTP  G 
Sbjct: 7   TVNATGKHTASVIFFHGSGDTGPNVLEWVRFLIGRNLEYPHIKIIYPTAPKQKYTPLDGE 66

Query: 536 MSNVWFDRANITPDVPEKLDSLA 604
           +SNVWFDR ++     E   S++
Sbjct: 67  LSNVWFDRKSVNIAASESKKSMS 89


>AY094672-1|AAM11025.1|  216|Drosophila melanogaster GH04560p
           protein.
          Length = 216

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 28/70 (40%), Positives = 34/70 (48%)
 Frame = +2

Query: 377 KQTATVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFPTAPLQPYTPAGGMMSNVWFD 556
           KQTAT+IF HG G TG     W   +      P +KV+ PTAP QP +   G     WFD
Sbjct: 12  KQTATLIFMHGLGDTGHG---WSSALAA-IRPPFMKVICPTAPTQPVSLNAGFRMPSWFD 67

Query: 557 RANITPDVPE 586
              +    PE
Sbjct: 68  LKTLDIGGPE 77


>AE014296-1993|AAS65031.1|  216|Drosophila melanogaster CG18815-PC,
           isoform C protein.
          Length = 216

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 28/70 (40%), Positives = 34/70 (48%)
 Frame = +2

Query: 377 KQTATVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFPTAPLQPYTPAGGMMSNVWFD 556
           KQTAT+IF HG G TG     W   +      P +KV+ PTAP QP +   G     WFD
Sbjct: 12  KQTATLIFMHGLGDTGHG---WSSALAA-IRPPFMKVICPTAPTQPVSLNAGFRMPSWFD 67

Query: 557 RANITPDVPE 586
              +    PE
Sbjct: 68  LKTLDIGGPE 77


>AE014296-1992|AAS65030.1|  216|Drosophila melanogaster CG18815-PB,
           isoform B protein.
          Length = 216

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 28/70 (40%), Positives = 34/70 (48%)
 Frame = +2

Query: 377 KQTATVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFPTAPLQPYTPAGGMMSNVWFD 556
           KQTAT+IF HG G TG     W   +      P +KV+ PTAP QP +   G     WFD
Sbjct: 12  KQTATLIFMHGLGDTGHG---WSSALAA-IRPPFMKVICPTAPTQPVSLNAGFRMPSWFD 67

Query: 557 RANITPDVPE 586
              +    PE
Sbjct: 68  LKTLDIGGPE 77


>AE014296-1991|AAG22322.1|  216|Drosophila melanogaster CG18815-PA,
           isoform A protein.
          Length = 216

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 28/70 (40%), Positives = 34/70 (48%)
 Frame = +2

Query: 377 KQTATVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFPTAPLQPYTPAGGMMSNVWFD 556
           KQTAT+IF HG G TG     W   +      P +KV+ PTAP QP +   G     WFD
Sbjct: 12  KQTATLIFMHGLGDTGHG---WSSALAA-IRPPFMKVICPTAPTQPVSLNAGFRMPSWFD 67

Query: 557 RANITPDVPE 586
              +    PE
Sbjct: 68  LKTLDIGGPE 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,274,600
Number of Sequences: 53049
Number of extensions: 487078
Number of successful extensions: 912
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)