Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17d06
         (348 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071437-1|AAL49059.1|  633|Drosophila melanogaster RE52151p pro...    28   3.7  
AE014298-1169|AAF46367.1|  633|Drosophila melanogaster CG11190-P...    28   3.7  
BT010056-1|AAQ22525.1| 1417|Drosophila melanogaster LD18032p pro...    27   4.9  
AE014134-3263|AAF53910.3| 1621|Drosophila melanogaster CG31678-P...    27   4.9  
AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA...    27   6.5  
AY052032-1|AAK93456.1|  402|Drosophila melanogaster LP01339p pro...    27   8.6  
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein...    27   8.6  
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ...    27   8.6  
AE013599-1693|AAF58383.1|  402|Drosophila melanogaster CG10814-P...    27   8.6  

>AY071437-1|AAL49059.1|  633|Drosophila melanogaster RE52151p
           protein.
          Length = 633

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 186 SASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLILHSFGLLVSL 329
           SA + + LP    Y  L    H+   SF     S  L LH+  L+VSL
Sbjct: 474 SAIVSSQLPMGRNYTALPPEGHLFEHSFNATRPSYVLSLHTEALIVSL 521


>AE014298-1169|AAF46367.1|  633|Drosophila melanogaster CG11190-PA
           protein.
          Length = 633

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 186 SASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLILHSFGLLVSL 329
           SA + + LP    Y  L    H+   SF     S  L LH+  L+VSL
Sbjct: 474 SAIVSSQLPMGRNYTALPPEGHLFEHSFNATRPSYVLSLHTEALIVSL 521


>BT010056-1|AAQ22525.1| 1417|Drosophila melanogaster LD18032p
           protein.
          Length = 1417

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +3

Query: 93  DPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSA---SIQASLPSSEIYRQLVDSRHVSSD 263
           + S    TP F+     N  T L +   +LLS     +QA L  S +   L++SR V  +
Sbjct: 599 EESVLCQTPAFEAFSCINCNTTLVERINSLLSCQFQQLQALLSLSHLRSDLLNSR-VCQE 657

Query: 264 SFGV 275
            FG+
Sbjct: 658 EFGI 661


>AE014134-3263|AAF53910.3| 1621|Drosophila melanogaster CG31678-PA
           protein.
          Length = 1621

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +3

Query: 93  DPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSA---SIQASLPSSEIYRQLVDSRHVSSD 263
           + S    TP F+     N  T L +   +LLS     +QA L  S +   L++SR V  +
Sbjct: 803 EESVLCQTPAFEAFSCINCNTTLVERINSLLSCQFQQLQALLSLSHLRSDLLNSR-VCQE 861

Query: 264 SFGV 275
            FG+
Sbjct: 862 EFGI 865


>AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA
            protein.
          Length = 4081

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 120  PFDTVLYDNIRTVLKDNKTALLSASIQASL 209
            P D V  +N+ TVL DNK   L+ S +  L
Sbjct: 1779 PVDAVWIENLNTVLDDNKMLCLANSERIKL 1808


>AY052032-1|AAK93456.1|  402|Drosophila melanogaster LP01339p
           protein.
          Length = 402

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 99  SCYFSTPPFDTVLYDNIRTV 158
           SC F T P D + +DN+R V
Sbjct: 344 SCRFKTTPGDVLTFDNLRLV 363


>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
           protein.
          Length = 2797

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 120 PFDTVLYDNIRTVLKDNKTALLS 188
           P D V  +N+ +VL DNKT  L+
Sbjct: 739 PVDAVWIENLNSVLDDNKTLTLA 761


>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
            protein.
          Length = 4671

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 120  PFDTVLYDNIRTVLKDNKTALLS 188
            P D++  +N+ +VL DNKT  L+
Sbjct: 2336 PVDSIWIENLNSVLDDNKTLTLA 2358


>AE013599-1693|AAF58383.1|  402|Drosophila melanogaster CG10814-PA
           protein.
          Length = 402

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 99  SCYFSTPPFDTVLYDNIRTV 158
           SC F T P D + +DN+R V
Sbjct: 344 SCRFKTTPGDVLTFDNLRLV 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,414,684
Number of Sequences: 53049
Number of extensions: 261661
Number of successful extensions: 633
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)