Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c19
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    24   5.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.4  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         23   7.1  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   9.4  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   9.4  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   9.4  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   9.4  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 304 KYHKMNGGDEDIAMHKARKALEEKYVK 384
           K  ++  G+ED+   K  K+   KYVK
Sbjct: 52  KKRELKAGEEDVLSKKRTKSNLRKYVK 78


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 493 SNDRLNNENTSTDYDTEDEERVNTFNSRKRRVVAKRAFNSKSK 621
           SNDR  N+N+ +  + ED   ++T    K   V    + +K K
Sbjct: 532 SNDRSPNQNSDSTENNEDLAYLDTLPEVKLVEVTSNIWGTKFK 574


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 414  RNPRIFQCIYFNVLFFERFSSFMHSNVFVAAV 319
            R   I+  +YF  +FF  F SF   N+F+  +
Sbjct: 1534 RETNIYMYLYF--VFFIIFGSFFTLNLFIGVI 1563


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 371 SSSAFLALCIAMSSSPPFIL*YFVNASTNNFLAR 270
           +S +F+ LC  + SS   I  Y   ++ N F  R
Sbjct: 59  TSLSFVFLCCCVPSSERLIYYYMCKSTKNTFTVR 92


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 308 YFVNASTNNFLARGGIFSLYN 246
           +F    T  FL +G +FS+YN
Sbjct: 81  FFDYYKTGAFLEKGELFSIYN 101


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 308 YFVNASTNNFLARGGIFSLYN 246
           +F    T  FL +G +FS+YN
Sbjct: 81  FFDYYKTGAFLEKGELFSIYN 101


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 308 YFVNASTNNFLARGGIFSLYN 246
           +F    T  FL +G +FS+YN
Sbjct: 81  FFDYYKTGAFLEKGELFSIYN 101


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 308 YFVNASTNNFLARGGIFSLYN 246
           +F    T  FL +G +FS+YN
Sbjct: 81  FFDYYKTGAFLEKGELFSIYN 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,035
Number of Sequences: 2352
Number of extensions: 10104
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)