Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17c15
(155 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 1.4
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 1.4
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 1.8
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 1.8
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 1.8
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 20 3.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 19 4.3
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 19 5.6
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 19 5.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 19 5.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 19 5.6
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 19 5.6
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 19 7.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 7.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 19 7.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 19 7.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 19 7.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 19 7.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 19 7.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 19 7.4
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 18 9.8
AY078401-1|AAL83704.1| 27|Apis mellifera major royal jelly pro... 18 9.8
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.0 bits (42), Expect = 1.4
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +3
Query: 54 SYIC*SFVLCLVNLLIICSVSCCR 125
S++ +LC ++L +C++S R
Sbjct: 113 SWVSLDILLCTASILSLCAISIDR 136
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.0 bits (42), Expect = 1.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 89 NETQNKRLTNI*KNNNERN 33
N+ NK+ N KNNN+ +
Sbjct: 433 NQKNNKKNANNQKNNNQND 451
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 20.6 bits (41), Expect = 1.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 129 YYDNTIHYRLLTN*RDTKQTTNKYMKK 49
Y N IHY + N DT Q++ K + K
Sbjct: 288 YQQNDIHYEGVQNILDT-QSSAKVVSK 313
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 1.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 129 YYDNTIHYRLLTN*RDTKQTTNKYMKK 49
Y N IHY + N DT Q++ K + K
Sbjct: 288 YQQNDIHYEGVQNILDT-QSSAKVVSK 313
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 1.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 129 YYDNTIHYRLLTN*RDTKQTTNKYMKK 49
Y N IHY + N DT Q++ K + K
Sbjct: 288 YQQNDIHYEGVQNILDT-QSSAKVVSK 313
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 142 RNSSIL-RQHDTLQIINKLTRHKTND*QIYEK 50
RN I+ + +DTLQ I+ + K IYE+
Sbjct: 336 RNIEIVAKNNDTLQFISGIKIIKQISSNIYER 367
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 19.4 bits (38), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = +1
Query: 16 PRTDRAFLSLLFFHIFVS---RL-FCVSLIC 96
PR +L L+ + +F + RL FCV L C
Sbjct: 129 PRDGLGWLLLMLYLLFATLPLRLSFCVVLAC 159
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 72 FVLCLVNLLIICSVSCC 122
F + L L + C V CC
Sbjct: 104 FGIHLCKLWLTCDVLCC 120
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 72 FVLCLVNLLIICSVSCC 122
F + L L + C V CC
Sbjct: 104 FGIHLCKLWLTCDVLCC 120
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.0 bits (37), Expect = 5.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 56 IYLLVVCFVSR*FVNNL*CI 115
+++ +VCFVS ++ L CI
Sbjct: 417 LFIAIVCFVS--YLIGLFCI 434
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.0 bits (37), Expect = 5.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 56 IYLLVVCFVSR*FVNNL*CI 115
+++ +VCFVS ++ L CI
Sbjct: 470 LFIAIVCFVS--YLIGLFCI 487
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 72 FVLCLVNLLIICSVSCC 122
F + L L + C V CC
Sbjct: 104 FGIHLCKLWLTCDVLCC 120
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 18.6 bits (36), Expect = 7.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 72 FVLCLVNLLIICSVSC 119
+V C+V L I C + C
Sbjct: 202 YVPCIVMLGIYCRLYC 217
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 18.6 bits (36), Expect = 7.4
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 127 LRQHDTLQIIN 95
+++HDT+ ++N
Sbjct: 189 IKEHDTVLVVN 199
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 18.6 bits (36), Expect = 7.4
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 127 LRQHDTLQIIN 95
+++HDT+ ++N
Sbjct: 189 IKEHDTVLVVN 199
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 18.6 bits (36), Expect = 7.4
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 127 LRQHDTLQIIN 95
+++HDT+ ++N
Sbjct: 189 IKEHDTVLVVN 199
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 18.6 bits (36), Expect = 7.4
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 127 LRQHDTLQIIN 95
+++HDT+ ++N
Sbjct: 178 IKEHDTVLVVN 188
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 18.6 bits (36), Expect = 7.4
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 127 LRQHDTLQIIN 95
+++HDT+ ++N
Sbjct: 194 IKEHDTVLVVN 204
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 18.6 bits (36), Expect = 7.4
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 127 LRQHDTLQIIN 95
+++HDT+ ++N
Sbjct: 189 IKEHDTVLVVN 199
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 18.6 bits (36), Expect = 7.4
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 127 LRQHDTLQIIN 95
+++HDT+ ++N
Sbjct: 189 IKEHDTVLVVN 199
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 93 LLIICSVSCCRNIELFLVKK 152
LL++C C+NI +V++
Sbjct: 6 LLMVCLGIACQNIRGGVVRE 25
>AY078401-1|AAL83704.1| 27|Apis mellifera major royal jelly
protein MRJP4 protein.
Length = 27
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 93 LLIICSVSCCRNIELFLVKK 152
LL++C C+NI +V++
Sbjct: 6 LLMVCLGIACQNIRGGVVRE 25
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,263
Number of Sequences: 438
Number of extensions: 523
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used: 2655300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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