Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c13
         (255 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011444-1|AAR99102.1|  967|Drosophila melanogaster RE49535p pro...    27   3.5  
AE014297-2827|AAF55788.3|  919|Drosophila melanogaster CG15923-P...    27   3.5  
AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA ...    27   3.5  
AY113222-1|AAM29227.1|  677|Drosophila melanogaster AT09218p pro...    27   4.6  
AE013599-3456|AAM71116.1|  422|Drosophila melanogaster CG30275-P...    27   4.6  
AE013599-3455|AAO41345.1|  677|Drosophila melanogaster CG30275-P...    27   4.6  
AE013599-3454|AAM71115.1| 1114|Drosophila melanogaster CG30275-P...    27   4.6  
AE013599-3453|AAM71114.1| 1127|Drosophila melanogaster CG30275-P...    27   4.6  
AE014134-654|AAF51077.1|   82|Drosophila melanogaster CG16713-PA...    26   6.0  
BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p pro...    26   8.0  
BT015198-1|AAT94427.1|  382|Drosophila melanogaster RE71283p pro...    26   8.0  
AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p pro...    26   8.0  
AY075526-1|AAL68333.1|  222|Drosophila melanogaster RE72863p pro...    26   8.0  
AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA...    26   8.0  
AE014134-1478|AAF52655.1|  381|Drosophila melanogaster CG13390-P...    26   8.0  

>BT011444-1|AAR99102.1|  967|Drosophila melanogaster RE49535p
           protein.
          Length = 967

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 175 LRILCFSPS-GWPKCAVVFNGSLNDFLPIASVTNAATTNSRI 53
           +R+ CFS +  W  C  +F  +L   +PI S+T AAT  S++
Sbjct: 3   MRMRCFSRAINW--CCALFWIALQIPVPICSLTTAATNPSQL 42


>AE014297-2827|AAF55788.3|  919|Drosophila melanogaster CG15923-PA
           protein.
          Length = 919

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 175 LRILCFSPS-GWPKCAVVFNGSLNDFLPIASVTNAATTNSRI 53
           +R+ CFS +  W  C  +F  +L   +PI S+T AAT  S++
Sbjct: 3   MRMRCFSRAINW--CCALFWIALQIPVPICSLTTAATNPSQL 42


>AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA
            protein.
          Length = 1459

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +2

Query: 26   SNIEHHEADYPAVCRGRV-CHT 88
            S+ EH E DYPAVC      HT
Sbjct: 969  SSQEHFETDYPAVCNANTNLHT 990


>AY113222-1|AAM29227.1|  677|Drosophila melanogaster AT09218p
           protein.
          Length = 677

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 233 NLLQINFTLNQFVFVFVVRS 174
           NL++INF LN+F+  + VR+
Sbjct: 317 NLVEINFRLNKFLLFYKVRA 336


>AE013599-3456|AAM71116.1|  422|Drosophila melanogaster CG30275-PB,
           isoform B protein.
          Length = 422

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 233 NLLQINFTLNQFVFVFVVRS 174
           NL++INF LN+F+  + VR+
Sbjct: 62  NLVEINFRLNKFLLFYKVRA 81


>AE013599-3455|AAO41345.1|  677|Drosophila melanogaster CG30275-PD,
           isoform D protein.
          Length = 677

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 233 NLLQINFTLNQFVFVFVVRS 174
           NL++INF LN+F+  + VR+
Sbjct: 317 NLVEINFRLNKFLLFYKVRA 336


>AE013599-3454|AAM71115.1| 1114|Drosophila melanogaster CG30275-PC,
           isoform C protein.
          Length = 1114

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 233 NLLQINFTLNQFVFVFVVRS 174
           NL++INF LN+F+  + VR+
Sbjct: 754 NLVEINFRLNKFLLFYKVRA 773


>AE013599-3453|AAM71114.1| 1127|Drosophila melanogaster CG30275-PA,
           isoform A protein.
          Length = 1127

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 233 NLLQINFTLNQFVFVFVVRS 174
           NL++INF LN+F+  + VR+
Sbjct: 767 NLVEINFRLNKFLLFYKVRA 786


>AE014134-654|AAF51077.1|   82|Drosophila melanogaster CG16713-PA
           protein.
          Length = 82

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 42  MKLIILLFVVAAFVTLAMGRKS 107
           MKL+IL+FV  AFV  A+  K+
Sbjct: 1   MKLLILVFVFVAFVANALALKN 22


>BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p
           protein.
          Length = 188

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 87  LAMGRKSLRDPLKTTAHFGHPEGLKHKIRRPY 182
           L  GR++ R   K   HFG   G+ H   RPY
Sbjct: 138 LLQGRRTARTACK---HFGKAPGVPHSHTRPY 166


>BT015198-1|AAT94427.1|  382|Drosophila melanogaster RE71283p
           protein.
          Length = 382

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +3

Query: 99  RKSLRDP-LKTTAHFGHPEG-LKHKIRRPYNKHEDK 200
           ++ L++P L  +A  GH  G L + IRR Y++H+D+
Sbjct: 342 QRRLQNPVLGISAKMGHNLGQLLNSIRRGYDRHKDQ 377


>AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p
           protein.
          Length = 188

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 87  LAMGRKSLRDPLKTTAHFGHPEGLKHKIRRPY 182
           L  GR++ R   K   HFG   G+ H   RPY
Sbjct: 138 LLQGRRTARTACK---HFGKAPGVPHSHTRPY 166


>AY075526-1|AAL68333.1|  222|Drosophila melanogaster RE72863p
           protein.
          Length = 222

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +3

Query: 99  RKSLRDP-LKTTAHFGHPEG-LKHKIRRPYNKHEDK 200
           ++ L++P L  +A  GH  G L + IRR Y++H+D+
Sbjct: 182 QRRLQNPVLGISAKMGHNLGQLLNSIRRGYDRHKDQ 217


>AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA
           protein.
          Length = 188

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 87  LAMGRKSLRDPLKTTAHFGHPEGLKHKIRRPY 182
           L  GR++ R   K   HFG   G+ H   RPY
Sbjct: 138 LLQGRRTARTACK---HFGKAPGVPHSHTRPY 166


>AE014134-1478|AAF52655.1|  381|Drosophila melanogaster CG13390-PA
           protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +3

Query: 99  RKSLRDP-LKTTAHFGHPEG-LKHKIRRPYNKHEDK 200
           ++ L++P L  +A  GH  G L + IRR Y++H+D+
Sbjct: 341 QRRLQNPVLGISAKMGHNLGQLLNSIRRGYDRHKDQ 376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,918,569
Number of Sequences: 53049
Number of extensions: 220706
Number of successful extensions: 546
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 431864640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)