Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c12
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.61 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   1.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   1.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   1.4  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    23   3.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   4.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 372 ILWCCFLVFFSLYLLRL 322
           +L+CC  +FF+++LL L
Sbjct: 180 LLFCCAFIFFNMHLLFL 196


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 231 RSYYERHGHWYLKC 190
           R  Y   GHWYL C
Sbjct: 454 RVIYSTVGHWYLDC 467


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 483 CLCNIHRFCDCSHPSMVLI 427
           CL  +  FCDCSH + + I
Sbjct: 292 CLFLLFVFCDCSHQASLNI 310


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 483 CLCNIHRFCDCSHPSMVLI 427
           CL  +  FCDCSH + + I
Sbjct: 292 CLFLLFVFCDCSHQASLNI 310


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 483 CLCNIHRFCDCSHPSMVLI 427
           CL  +  FCDCSH + + I
Sbjct: 292 CLFLLFVFCDCSHQASLNI 310


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 383 FIVRFYGVVFWFFSHYI 333
           F++ F+GV F  FS ++
Sbjct: 4   FVILFFGVFFIIFSDFV 20


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 177 VVVPHCIVPSNSYPQQLLHRQKL*FLPL 94
           ++V  C   S S PQQ+L+  K   LPL
Sbjct: 9   LIVACCWGKSLSIPQQILNEFKSTLLPL 36


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 190 ALQVPVTVPLVVAPEAIQSVQGKLQSGRNPSPDSSPPRTLIM 315
           A  +P+ VP+     +  S        ++P P+S  P +L++
Sbjct: 193 ASPLPLLVPIPQRTASTASSASNYSPSQSPEPESVRPLSLVV 234


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -2

Query: 401 CWCFILFIVRFYGVVFWFF 345
           C+C+    +R    + WFF
Sbjct: 554 CYCYYSISIRPISTLGWFF 572


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,371
Number of Sequences: 336
Number of extensions: 3019
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)