Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17c12
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0626 - 5445676-5446687,5447099-5447430 35 0.074
09_04_0356 - 16925821-16925969,16926056-16926165,16926261-169263... 32 0.39
05_05_0299 - 23930657-23932627 32 0.39
09_06_0137 - 21080263-21081894 32 0.52
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 31 1.2
06_03_0601 - 22650370-22650623,22650786-22650792 31 1.2
01_03_0055 + 12074512-12076155 31 1.2
11_06_0679 - 26227654-26227770,26234067-26236217 30 2.1
10_06_0155 + 11306808-11306956,11307157-11307418,11307496-113076... 30 2.1
06_03_1181 - 28227746-28229115,28229130-28229307 30 2.1
10_06_0139 - 11139004-11139031,11139300-11141017,11141408-111414... 29 3.7
03_03_0162 - 14964106-14964644,14964810-14965020 29 3.7
02_05_0415 + 28787353-28787496,28787658-28788204,28788297-287883... 29 3.7
12_01_0311 + 2345492-2346325 29 4.8
11_06_0710 - 26492093-26493460 29 4.8
09_01_0016 - 376742-376883,377973-378964 29 4.8
07_03_0487 - 18663890-18663964,18664286-18664441,18664693-186652... 29 4.8
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 29 4.8
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 6.4
03_04_0054 + 16883678-16883719,16884667-16884723,16884852-168849... 28 6.4
03_02_0202 + 6366066-6367292,6367529-6367753,6368422-6368799 28 6.4
01_05_0050 + 17579872-17580103,17580206-17580262,17581178-175814... 28 6.4
08_01_0042 - 295635-296267,296451-297419 28 8.5
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 28 8.5
03_06_0146 - 31976538-31978643,31978653-31978751 28 8.5
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131... 28 8.5
02_01_0244 + 1603381-1603792,1604054-1604132,1604993-1605862,160... 28 8.5
01_07_0047 + 40731508-40731714,40731834-40731893,40731992-407321... 28 8.5
01_05_0077 + 17928962-17929392,17929472-17929568,17929700-179297... 28 8.5
01_01_0092 + 722744-723459,723542-723711,723792-724885 28 8.5
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 34.7 bits (76), Expect = 0.074
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 303 DSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSHKIDEYYTN 482
D D G DEE I + +NN + DDEE E ++ LDE + + + E +DE +
Sbjct: 224 DEDEGEEDEE-IEEDEDENN--DDDDEEEEMEEDEDLDED-KNDVVEEEEDEDMDEGEDD 279
Query: 483 NNDVNGDGHEKK 518
N+ N + +K
Sbjct: 280 ENETNEEWEVRK 291
Score = 32.7 bits (71), Expect = 0.30
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +3
Query: 369 ESDDEENETPTNQVL--DETLELEPLTGENSHKIDEYYTNNNDVNGDGHEKKTLEEXXXX 542
E ++EE E ++ L DE ++ + GE +I+E NND D E++ +EE
Sbjct: 201 EEEEEEEEEEEDEFLYEDENVDDDEDEGEEDEEIEEDEDENND---DDDEEEEMEEDEDL 257
Query: 543 XXXXXXXXXXXXXENLDYNSDRKRYRDEKDAHEENAAQKIK 665
E++D D DE + +EE +K K
Sbjct: 258 DEDKNDVVEEEEDEDMDEGED-----DENETNEEWEVRKNK 293
>09_04_0356 -
16925821-16925969,16926056-16926165,16926261-16926386,
16926485-16926572,16926648-16926768,16926902-16926974,
16927395-16927458,16928019-16928062,16928160-16928218,
16928771-16928870,16929043-16929146
Length = 345
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 261 PKWQKPITRFFASKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDE---TLEL 431
P+WQKP+ +D DE+ + + KP ++ + Q LD+ TL++
Sbjct: 40 PEWQKPLAAQRRVQDRKLQILDEDFVAKPKPTDDRDVMSEVTKTHEAIQYLDKSIATLQM 99
Query: 432 EPLTGENSHKIDE 470
E L GE K++E
Sbjct: 100 E-LAGEELKKLEE 111
>05_05_0299 - 23930657-23932627
Length = 656
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 303 DSDHGSTDEEDIVRKKPKNNT--IESDDEENETPTNQVLDETLELEPLTGENSHKIDEYY 476
D D G D++D+ + KPK + DD+E + T Q+L + + ENS + +++
Sbjct: 204 DGD-GGEDDDDLFQVKPKGGDGGNKEDDDEEKKETEQILIDIFGKDEELDENSKFLKKFF 262
Query: 477 TNNNDVNGDGHEKK 518
+ G EKK
Sbjct: 263 LERPYLE-TGSEKK 275
>09_06_0137 - 21080263-21081894
Length = 543
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 154 HDAMWHHHRVHPALQVPVTVPL-VVAPEAIQSVQGKLQSGRNP 279
H A+ H R HPA VP T P PE ++ G L S +P
Sbjct: 63 HAALVDHRRAHPAAPVPATAPSEPPLPELSSALSGLLASPPSP 105
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 312 HGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSHKIDEYYTNNND 491
+GS D++D + K+N E +D+E ET ++ E E E K D
Sbjct: 188 NGSADKKDKEEETEKDNEKEKEDKEEET------EKDNEKEKEDKEEETKKDNEKEKEQL 241
Query: 492 VNGDGHEKKTLEEXXXXXXXXXXXXXXXXXENLD--YNSDRKRYRDEKDAHEENAAQKIK 665
+ D EK+ +E E L+ + + +EKD +N +K+K
Sbjct: 242 MGTDEKEKEKEKEDENEEEKLEEEEKKDKEEKLEEKEKENEEENGNEKDKENDNEIEKVK 301
>06_03_0601 - 22650370-22650623,22650786-22650792
Length = 86
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 366 IESDDEENETPTNQVLDETLE--LEPLTGENSHKIDEYYTNNNDVNGDGHEKKT 521
I SD + +P+ + + E E +EP G SH + T N + GD H+K T
Sbjct: 3 IASDGQHGVSPSGEPIHEGPEKPIEP-PGPPSHNLHAAVTENEGIAGDVHDKVT 55
>01_03_0055 + 12074512-12076155
Length = 547
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = +3
Query: 300 KDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSHKIDEYYT 479
KDS G D+ED P +N ++ +D++++ ++V ++ + G H++ ++
Sbjct: 308 KDSSAGPEDDEDDSEDVPSSNEVDDEDDDDDDDDDEV-GPGMKSRRIYG--GHRVHHHHH 364
Query: 480 NNNDVNGDGHEKK 518
++N GH K+
Sbjct: 365 HHN-----GHHKR 372
>11_06_0679 - 26227654-26227770,26234067-26236217
Length = 755
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 175 HRVHPALQVPVTVPLVVAPEAIQSVQGKLQSGRNPSPDSSPPRTLIMALQT 327
H+ HP L + +P P +QS + Q +N +P P+T I +QT
Sbjct: 193 HQTHPVLPNQIQIP---QPHILQSNIPRTQLPQNDTPQIQVPQTQIPQIQT 240
>10_06_0155 +
11306808-11306956,11307157-11307418,11307496-11307697,
11308118-11308353
Length = 282
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 288 FFASKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQ 407
F S +DH + E+ + ++ +N+ IE+DD+++ + T +
Sbjct: 236 FTDSSSNDHSNGTEDSLRDEESENSKIETDDKDSNSDTEE 275
>06_03_1181 - 28227746-28229115,28229130-28229307
Length = 515
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 175 HRVHPALQVPVTVPLVVAPEAIQSVQGKLQSGRNPSPDSSPPRTLIMALQT 327
H+ HP L + +P P +QS + Q +N +P P+T I +QT
Sbjct: 168 HQTHPVLPNQIQIP---QPHILQSNIPRTQLPQNDTPQIQVPQTQIPQIQT 215
>10_06_0139 -
11139004-11139031,11139300-11141017,11141408-11141477,
11142520-11143361
Length = 885
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 297 SKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSHKI---D 467
+K+ DHGS +E++ + + ++ D+E+ QV + PL E H I D
Sbjct: 806 TKEKDHGSEEEQNAIMSANFDEYHQTQDKESSDANKQV----GSIVPLPREQEHGILEHD 861
Query: 468 EYYTNNND 491
EY + D
Sbjct: 862 EYAPKDPD 869
>03_03_0162 - 14964106-14964644,14964810-14965020
Length = 249
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 377 VRFYGVVFWFFSHYIFFVCRAMIRV 303
+ F+ V F+FFS + FF C + R+
Sbjct: 13 LEFFLVEFYFFSRFFFFACNRLKRI 37
>02_05_0415 +
28787353-28787496,28787658-28788204,28788297-28788392,
28788532-28788645,28788929-28789962,28790053-28790124
Length = 668
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 303 DSDHGSTDEEDIVRKKPKNNTIE---SDDEENETPTNQVLDETLELEPLTGENSHKIDEY 473
D T EED + + K + +E +D ++T + L+E E + +ID
Sbjct: 366 DVTDDKTSEEDDLNEVEKLSAVEIPQADLTGDKTSEEEDLNEVKEGSAYENPQADRIDAE 425
Query: 474 YTNNNDVNGDGHEKKTLEE 530
+ +D++GD E+ ++E
Sbjct: 426 SSEEDDLDGDYSEESDIDE 444
>12_01_0311 + 2345492-2346325
Length = 277
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 312 HGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSHKI 464
HG D+ED + P + + DD++ +QVL L ++GE + +I
Sbjct: 97 HGENDDEDAMMAAPLPSIDDEDDDDGSPLLDQVLCYLLLNGIISGERALQI 147
>11_06_0710 - 26492093-26493460
Length = 455
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 255 ETPKWQKPITRFFASKDSDHGSTDEEDIVRKKPKNNTIESDDEE--NETPTNQVLDE 419
E+ K +K + SK SD D E +KK KN+ + DD++ + P N DE
Sbjct: 132 ESEKKKKKKKKKSKSKSSDDDDDDAEKKSKKKSKNSDDDEDDKKKSKKKPKNPDDDE 188
>09_01_0016 - 376742-376883,377973-378964
Length = 377
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 303 DSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSH 458
D + S+D+E + + N SDD+E++ + D+ + L+P N +
Sbjct: 165 DQESDSSDDETLPALQANKNASPSDDDEDDDQESDSGDDDVLLDPALQANKN 216
>07_03_0487 -
18663890-18663964,18664286-18664441,18664693-18665295,
18665566-18665894,18665992-18666504,18667128-18667242,
18667326-18667397,18667480-18667644,18668604-18668752,
18668830-18668899,18668975-18669121,18669199-18669267,
18669366-18669416,18669537-18669629,18670122-18670211
Length = 898
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 208 TVPLVVAPEAIQSVQGKLQSGRNPSPDSS 294
+VPL APE +V G+ Q G + P S
Sbjct: 101 SVPLTTAPEGANNVNGRTQPGNHAQPGFS 129
>02_05_0226 + 26971851-26972034,26972734-26972834,26972876-26972978,
26973335-26973477,26973525-26973605,26973929-26974015,
26974097-26974239,26974746-26974896,26974973-26975095,
26975362-26975445,26975531-26975718,26976726-26976900,
26977008-26977129,26977231-26977310,26977532-26977590,
26977921-26978075,26978680-26978858,26980050-26980162,
26980243-26980413,26980552-26980680,26980756-26980856,
26980942-26981059,26981739-26981818,26983230-26983302,
26983865-26983950,26984025-26984076,26984221-26984352,
26984560-26984628,26984912-26985004,26985806-26985901,
26986710-26986808,26986894-26986986,26987459-26987608,
26988391-26988549
Length = 1323
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 103 ELKLLSVQKLLWVRVRRHDAMWHHHRVHPAL 195
+LK+ ++++ WV V ++ W H R P+L
Sbjct: 1290 DLKIQLIEEIGWVHVSAYEKQWMHVRFPPSL 1320
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +3
Query: 252 RETPKWQKPITRFFASKDS----DHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDE 419
RE K ++ +T ++S DS D + +K K N E+ + D
Sbjct: 430 REHRKKKRDVTESYSSSDSEVEVDRDTRRHPKREHRKEKRNMTENGHSSRSREKHHYSD- 488
Query: 420 TLELEPLTGENSHKIDEYYTNNNDVNGDGHEKKTLEE 530
T + HK ++YY++++ + H +++ E+
Sbjct: 489 TSTSDNEKHSMGHKDEQYYSDSSSSRSNRHSRRSREK 525
>03_04_0054 +
16883678-16883719,16884667-16884723,16884852-16884959,
16885028-16885102,16885744-16885833,16885950-16886057,
16886137-16886211,16886371-16886433,16886531-16886924,
16888539-16888651,16888799-16888829,16888987-16889864
Length = 677
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 264 KWQKPITRFFASKDSDHGSTDEEDIVRKKPKNN-TIESDDEENETPTNQVLDETLELEPL 440
K+++ IT++ D+ + + + PKN ++E + N+ P N V E++ L
Sbjct: 227 KYEENITKYSECDLDDNNNECANNEKGRFPKNKASLEPSERVNDVPKNFVGAAPTEVQIL 286
Query: 441 TGENSHKIDEYYTNNNDVNGDGHEKKT 521
+ E + + + V GD + KT
Sbjct: 287 SNEQALSKTPFAKVVSTVEGDRTDMKT 313
>03_02_0202 + 6366066-6367292,6367529-6367753,6368422-6368799
Length = 609
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 318 STDEEDIVRKKPKNNTIESDDEENETPTNQVLDE 419
+T++ED + KN E DD +++T T+Q L E
Sbjct: 540 ATEKEDTEKVSLKNIMAEDDDNDDDTTTHQQLLE 573
>01_05_0050 +
17579872-17580103,17580206-17580262,17581178-17581413,
17581509-17581637,17581752-17581811,17582088-17582158,
17582568-17582673,17582753-17582791
Length = 309
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 294 ASKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSHKIDEY 473
+ DSD EE ++ + E +DE++ + ++ ELEP+ + S
Sbjct: 26 SGSDSDREPA-EEAAPTEEVEEQQEEQEDEQHVGEEDSGEEQEEELEPVVEQESSGYQSE 84
Query: 474 YTNNNDVN 497
Y++ NDV+
Sbjct: 85 YSSGNDVD 92
>08_01_0042 - 295635-296267,296451-297419
Length = 533
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 312 HGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEP 437
H T +D VRK + DD N V+ ETL L P
Sbjct: 349 HLMTKLQDEVRKNTTTQMVSEDDLNNMPYLKAVVKETLRLHP 390
>04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 291 FASKDSDHGSTDEEDIVRKKPKNNTIESDDEENET 395
F+ + S HG D+ +++K+ K++ +DE +T
Sbjct: 977 FSKRSSAHGGRDQALVLKKRNKDDAWRDNDETKKT 1011
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 27.9 bits (59), Expect = 8.5
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = +3
Query: 303 DSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSHKID-EYYT 479
D D DE+D + ++ ++ I DDEE P E TG + + D + YT
Sbjct: 159 DGDIECFDEDDGICEENPDDEIFDDDEEESDPE----------EDDTGSSDLETDSDEYT 208
Query: 480 NNNDVNGDGHEKKTLEEXXXXXXXXXXXXXXXXXENLDYNSDRKRYRDEKDAHEENAAQK 659
+ D D E+ T + E+ D SD + D+++ +E+ +
Sbjct: 209 ESTDEESDYEEEDTTD---------LESDSDEDTESTDEESDYEEEIDDEEIDDESVEED 259
Query: 660 IKVD*E 677
I +D E
Sbjct: 260 INLDDE 265
>03_06_0014 -
31012116-31012229,31012773-31012985,31013058-31013171,
31013909-31014040,31014624-31014692,31014763-31015017,
31015347-31015520,31016104-31016280,31016999-31017107,
31017343-31017506,31018221-31018517
Length = 605
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +3
Query: 297 SKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSHKIDEYY 476
S++S++ TD EDI P N + DEE E P +V+ +T + E H +
Sbjct: 522 SEESEY-ETDVEDI-DNSPTNGREDDMDEEEEDP-EEVIGDTSMSDENNEEQEHVKERKG 578
Query: 477 TNNND 491
N++D
Sbjct: 579 FNSDD 583
>02_01_0244 +
1603381-1603792,1604054-1604132,1604993-1605862,
1606019-1606276,1606675-1606834
Length = 592
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 294 ASKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLT----GENSHK 461
+ KD D TD+ I++ P+ + +S ++ E PT + + L ++P G NS K
Sbjct: 298 SEKDGDTLWTDQSGIIKVNPEESKNDSCVDDIEKPTKET--DLLSVDPCNCCCDGGNSRK 355
Query: 462 IDEYYTN 482
++ +N
Sbjct: 356 SEDNPSN 362
>01_07_0047 +
40731508-40731714,40731834-40731893,40731992-40732159,
40732198-40732203,40732898-40732961,40733395-40733690,
40733799-40733903,40734030-40734066,40734309-40734403,
40735226-40735282,40735361-40735438,40735527-40735586
Length = 410
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 300 KDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENSH 458
+++D GST EED +++ + DDEE+ P+ ++ E L +N H
Sbjct: 197 EENDAGSTSEED-----GEDDEDDEDDEEDAGPSEDDKEDEEEENILIDDNDH 244
>01_05_0077 +
17928962-17929392,17929472-17929568,17929700-17929747,
17929833-17929996,17930454-17930469
Length = 251
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 324 DEEDIVRKKPKNNTIESDDEENE 392
D+EDI +N IESD+EE E
Sbjct: 207 DDEDIEEMADVDNNIESDEEEEE 229
>01_01_0092 + 722744-723459,723542-723711,723792-724885
Length = 659
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 300 WRRRIW*WVSATLEFPLDRLDCLRSYYERHGH-WYLKCWVYSVVVPHCIV 154
+ R I W SA + L L C+ +YY W V++V + CI+
Sbjct: 246 YSRNIQNWTSAIIGTELQFLGCVINYYSSATQVWVTLVLVFAVEIVKCII 295
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,357,980
Number of Sequences: 37544
Number of extensions: 313788
Number of successful extensions: 1347
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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