Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c12
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   1.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   2.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   4.1  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    24   5.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.5  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    23   9.5  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 255 ETPKWQKPITRFFASKDSDHGSTDEED 335
           E P+ +KP TRF         + DEED
Sbjct: 91  EQPRQRKPSTRFNVEGGESDSNDDEED 117


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 231 RSYYERHGHWYLKCW-VYSVVVPHCIVPSN 145
           R Y+ R     +K W  Y + VP+C+VPS+
Sbjct: 665 RRYFFRACAGNVKGWGPYKLSVPNCVVPSS 694


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 309 DHGSTDEEDIVRKKPKNNTIESDDE 383
           DHG  DEE  +  + KN T  +D +
Sbjct: 3   DHGVVDEEAPIDPRLKNRTFTADQD 27


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 531 ILPRFFFRVHPHSHHCCLCNIHRF 460
           IL R   R+ P +H C L   H F
Sbjct: 14  ILKRTVCRLKPSAHRCLLAGSHSF 37


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 486 CCLCNIHRFCDCSHPSMVLILMF 418
           C LC+   FC+C      L  M+
Sbjct: 57  CTLCDTRHFCECKETREPLPYMY 79


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -1

Query: 513 FRVHPHSHHCCLCNIHRFCDC 451
           F+    SH  C   +HR C C
Sbjct: 456 FKQPAFSHSVCSTEVHRSCFC 476


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -1

Query: 513 FRVHPHSHHCCLCNIHRFCDC 451
           F+    SH  C   +HR C C
Sbjct: 456 FKQPAFSHSVCSTEVHRSCFC 476


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 216 RHGHWYLKCWVYSVVVPHCI 157
           RH +W  +C+ Y+   PH +
Sbjct: 25  RHNYWRDRCFPYTRQKPHLL 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,723
Number of Sequences: 2352
Number of extensions: 12202
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)