Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c10
         (243 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.21 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   1.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   3.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    19   5.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    19   7.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.21
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 232 YNLLQINFTLNQXVFVF 182
           +N+L  N TLN  VF+F
Sbjct: 76  FNILMKNVTLNDVVFIF 92


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 1.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 106 ERSIKNYGTFWPSRGAETXDSKTLQQ 183
           ER +KNY      RGA T D+  L++
Sbjct: 35  ERLLKNYFNCIMDRGACTPDADELKR 60


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 124 YGTFWPSRGAETXDSKTL 177
           YG  WP   + T  S TL
Sbjct: 68  YGALWPQPTSVTKISSTL 85


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 19.4 bits (38), Expect = 5.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 79  DKRGHDKQQDNQLHGVLYS 23
           +K   DK+ D  +HG + S
Sbjct: 171 EKDEEDKRDDTDMHGRIKS 189


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 19.0 bits (37), Expect = 7.7
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -2

Query: 29  IFDNIWV 9
           IFDN+W+
Sbjct: 152 IFDNVWL 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,284
Number of Sequences: 336
Number of extensions: 1023
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3642386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)