Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c10
         (243 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457169-1|CAG33450.1|  178|Homo sapiens HSPC111 protein.              29   2.7  
AY240161-1|AAO86898.1|  129|Homo sapiens anti-HAV capsid immunog...    28   4.8  
BC040106-1|AAH40106.1|  178|Homo sapiens hypothetical protein HS...    27   8.4  
AY561704-1|AAS66977.1|  178|Homo sapiens HBV pre-S2 trans-regula...    27   8.4  
AF151875-1|AAD34112.1|  178|Homo sapiens CGI-117 protein protein.      27   8.4  

>CR457169-1|CAG33450.1|  178|Homo sapiens HSPC111 protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 28  IEHHEADYPAVCRGRVCHTRYGQKIIERSIKNYGTFWPSRGAETXDSKTLQQTRRXID 201
           +E+H  DY A+ R    + +   K I   I  Y  F+P+   +  DS  LQ+ +  +D
Sbjct: 123 VENHGEDYKAMARDEKNYYQDTPKQIRSKINVYKRFYPAEWQDFLDS--LQKRKMEVD 178


>AY240161-1|AAO86898.1|  129|Homo sapiens anti-HAV capsid
           immunoglobulin G heavy chain variable region protein.
          Length = 129

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 156 FSPSGWPKCAVVFNGSLNDF-LPIASVTNAATTNSRIISFMVFYIRQYMG 10
           ++PS   + A+  + S N F L ++SVT A T       F  +Y+R Y G
Sbjct: 59  YNPSLKSRVAISVDTSKNQFSLKLSSVTAADTAVYYCARFSDYYVRDYYG 108


>BC040106-1|AAH40106.1|  178|Homo sapiens hypothetical protein
           HSPC111 protein.
          Length = 178

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +1

Query: 28  IEHHEADYPAVCRGRVCHTRYGQKIIERSIKNYGTFWPSRGAETXDSKTLQQTRRXID 201
           +E+H  DY A+ R    + +   K I   I  Y  F+P+   +  DS  LQ+ +  ++
Sbjct: 123 VENHGEDYKAMARDEKNYYQDTPKQIRSKINVYKRFYPAEWQDFLDS--LQKRKMEVE 178


>AY561704-1|AAS66977.1|  178|Homo sapiens HBV pre-S2 trans-regulated
           protein 3 protein.
          Length = 178

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +1

Query: 28  IEHHEADYPAVCRGRVCHTRYGQKIIERSIKNYGTFWPSRGAETXDSKTLQQTRRXID 201
           +E+H  DY A+ R    + +   K I   I  Y  F+P+   +  DS  LQ+ +  ++
Sbjct: 123 VENHGEDYKAMARDEKNYYQDTPKQIRSKINVYKRFYPAEWQDFLDS--LQKRKMEVE 178


>AF151875-1|AAD34112.1|  178|Homo sapiens CGI-117 protein protein.
          Length = 178

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +1

Query: 28  IEHHEADYPAVCRGRVCHTRYGQKIIERSIKNYGTFWPSRGAETXDSKTLQQTRRXID 201
           +E+H  DY A+ R    + +   K I   I  Y  F+P+   +  DS  LQ+ +  ++
Sbjct: 123 VENHGEDYKAMARDEKNYYQDTPKQIRSKINVYKRFYPAEWQDFLDS--LQKRKMEVE 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,307,765
Number of Sequences: 237096
Number of extensions: 517659
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1388364868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)