Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c10
         (243 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA ...    27   3.5  
AE014134-654|AAF51077.1|   82|Drosophila melanogaster CG16713-PA...    26   6.1  

>AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA
            protein.
          Length = 1459

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +1

Query: 22   SNIEHHEADYPAVCRGRV-CHT 84
            S+ EH E DYPAVC      HT
Sbjct: 969  SSQEHFETDYPAVCNANTNLHT 990


>AE014134-654|AAF51077.1|   82|Drosophila melanogaster CG16713-PA
           protein.
          Length = 82

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 38  MKLIILLFVVAAFVTLAMGRKS 103
           MKL+IL+FV  AFV  A+  K+
Sbjct: 1   MKLLILVFVFVAFVANALALKN 22


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,913,256
Number of Sequences: 53049
Number of extensions: 156201
Number of successful extensions: 383
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)