Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c07
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    27   0.39 
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        25   2.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.8  

>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 536 PARRCTSGTKCSSSACGLWCSATAR 462
           P + C +  KC+S  CG  C   +R
Sbjct: 2   PCKTCVADCKCTSPNCGAGCGCESR 26


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
 Frame = -2

Query: 572 PQA--DVLEVNQSPPARRCT-SGTKCSSSACGLWCSATARSEATAL 444
           PQA  D+LE        R + +GTK ++     WC    R   T L
Sbjct: 136 PQAYTDLLEQMYRTSVERVSFNGTKATAERINTWCEKVTRGRITEL 181


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 473  ATARSEATALSRTTVSSTAANVSRGGRRQCANSPP 369
            A  R ++ +LS  ++ S  +  S GGR      PP
Sbjct: 988  AVVRPQSLSLSMNSMGSDNSEQSSGGRLSSGGGPP 1022


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 545 QSPPARRCTSGTKC 504
           Q PP + CTSG  C
Sbjct: 81  QGPPGKNCTSGGCC 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,448
Number of Sequences: 2352
Number of extensions: 10884
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)