Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17c03
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   1.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.3  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 546 RHRSTPYERPTLEDLHRQL 602
           RH++TPY  P  + +H  L
Sbjct: 345 RHKNTPYHTPEPDCIHELL 363


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 509 NKQNAKGHQQSPPPPVY 559
           N  N+K  Q S PP +Y
Sbjct: 185 NNNNSKSSQSSNPPQIY 201


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 668  YGAEPVLTLPSTHLIAPLQSVFQLS 594
            YG    +T+PS +L+  + SVF ++
Sbjct: 1004 YGVIYYVTVPSMYLLLVIYSVFNMN 1028


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 668  YGAEPVLTLPSTHLIAPLQSVFQLS 594
            YG    +T+PS +L+  + SVF ++
Sbjct: 1004 YGVIYYVTVPSMYLLLVIYSVFNMN 1028


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 509 NKQNAKGHQQSPPPPVY 559
           N  N+K  Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 509 NKQNAKGHQQSPPPPVY 559
           N  N+K  Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 81  CLRVERSLYLYCLSVVYD 134
           C  + R  Y YC+S+ ++
Sbjct: 50  CYNLRRIYYFYCVSITFN 67


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 509 NKQNAKGHQQSPPPPVY 559
           N  N+K  Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 509 NKQNAKGHQQSPPPPVY 559
           N  N+K  Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 509 NKQNAKGHQQSPPPPVY 559
           N  N+K  Q S PP +Y
Sbjct: 141 NNNNSKSGQSSNPPQIY 157


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 509 NKQNAKGHQQSPPPPVY 559
           N  N+K  Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 509 NKQNAKGHQQSPPPPVY 559
           N  N+K  Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 616 SKASSNCLWRSSSVGRSYGVD 554
           SK + N  W+ S V  S G+D
Sbjct: 443 SKNTFNTFWQQSDVDLSRGMD 463


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 331 FFAIQKSSPMFDI*YTVRTLQIVDYFIRIVYT 236
           FFA   +SP+F++ Y        + F+R V+T
Sbjct: 145 FFAQGLTSPIFNLVYVYCCDNNFNVFLRQVFT 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,290
Number of Sequences: 336
Number of extensions: 3693
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)