Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17c02
(657 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 64 4e-12
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 32 0.014
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 29 0.13
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 28 0.30
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 2.1
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 25 2.8
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 24 3.7
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 4.9
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 23 6.4
AF203335-1|AAF19830.1| 175|Anopheles gambiae immune-responsive ... 23 6.4
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 64.1 bits (149), Expect = 4e-12
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 328 YDEEPLDFSIKKEDKPATSKRRRNDKCRKSKEKKPKVYGCNLCSAQYKNAQELRAHSLEH 507
YD E D+ +++E +PA + R +++++ Y CN C+ L H H
Sbjct: 93 YDFEDPDYIVQEEQEPAKKTQTRG---KRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTH 149
Query: 508 QVKTRHKCDECGRYFKKAFSLRLHQKIHT-TMEFDCRFCDMKFTSKGHLFR 657
HKC C R FK SL+ H HT T C+ CD FT+ G L R
Sbjct: 150 SEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIR 200
Score = 46.0 bits (104), Expect = 1e-06
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 433 KVYGCNLCSAQYKNAQELRAHSLEHQV--KTRHKCDECGRYFKKAFSLRLH-QKIHTT-M 600
K Y C++C A++ + L+AH + HQV K +C C + LR+H Q +HT
Sbjct: 266 KPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADK 325
Query: 601 EFDCRFCDMKFTSK 642
C+ CD F +
Sbjct: 326 PIKCKRCDSTFPDR 339
Score = 40.3 bits (90), Expect = 5e-05
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Frame = +1
Query: 346 DFSIKKEDKPATSKRRRNDKCRKSKEKKPKVYGCNLCSAQYKNAQELRAHSLEHQVKTRH 525
D IK + +T R + K + K Y C C + + L +H L H + +
Sbjct: 324 DKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPY 383
Query: 526 KCDECGRYFKKAFSLRLHQKIHTTMEF----------DCRFCDMKFTSKGHLFR 657
KCD+C + F++ L+ H + ++ C C F KG+L R
Sbjct: 384 KCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIR 437
Score = 33.1 bits (72), Expect = 0.008
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Frame = +1
Query: 433 KVYGCNLCSAQYKNAQELRAH-SLEHQVKTRHKCDECGRYFKKAFSLRLHQKIHT-TMEF 606
K + C C + + EL H H + HKC EC + L+ H + HT F
Sbjct: 181 KPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPF 240
Query: 607 DCRFCDMKFTSKGHLFR 657
C C K L R
Sbjct: 241 QCPHCTYASPDKFKLTR 257
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 32.3 bits (70), Expect = 0.014
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 439 YGCNLCSAQYKNAQELRAHSLE-HQVKTRH---KCDECGRYFKKAFSLRLHQK-IH 591
+ CNLC Y+ + + H E H++ + KC C + F + +LH + IH
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 29.1 bits (62), Expect = 0.13
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 430 PKVYGCNLCSAQYKNAQELRAHSLEHQVKTRHKCDECGRYFKKAFSLRLHQKI 588
P +Y C C +K H+ H+ ++ H+C CG+ F + +++ H K+
Sbjct: 896 PTLYSCVSC---HKTVSNRWHHANIHRPQS-HECPVCGQKFTRRDNMKAHCKV 944
Score = 25.0 bits (52), Expect = 2.1
Identities = 11/45 (24%), Positives = 18/45 (40%)
Frame = +1
Query: 517 TRHKCDECGRYFKKAFSLRLHQKIHTTMEFDCRFCDMKFTSKGHL 651
T + C C + + H IH +C C KFT + ++
Sbjct: 897 TLYSCVSCHKTVSNRWH---HANIHRPQSHECPVCGQKFTRRDNM 938
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 27.9 bits (59), Expect = 0.30
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 154 MSMASNDTDETRNSDGSSDDECLSEVKRKVDLARSKSGDDSD 279
+S +S D+DE +GS D + R+++ A + +D D
Sbjct: 1161 LSASSTDSDEDDEEEGSGDRHRADDATRRLNGAGNNDDEDED 1202
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 25.0 bits (52), Expect = 2.1
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +1
Query: 208 DDECLSEVKRKVDLARSKSGDDSDYEPIISEIMVSIEVDE--YDEEPLDFSIKKEDKPAT 381
DD + K +D DY+ S+ + + D+ Y+E+ E A+
Sbjct: 753 DDGFMDHDKDNLDSDNDPMNISDDYDGQDSDTKIPVAEDDEGYEEQDTPGETFDELPTAS 812
Query: 382 SKRRRNDKCRKSKEKKP 432
++ RR + K KKP
Sbjct: 813 ARPRRLSELSVKKSKKP 829
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 24.6 bits (51), Expect = 2.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 172 DTDETRNSDGSSDDECLSEVKRKVDLARSKSGDDSDYE 285
D E DGS D+E L E + + A + D+S+ E
Sbjct: 64 DAPEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESE 101
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 24.2 bits (50), Expect = 3.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 348 IEWLFVILVYFY*DHYLRYYRLII 277
I WL++I VYF + ++ L+I
Sbjct: 262 IHWLYMIFVYFLPFSLISFFNLMI 285
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.8 bits (49), Expect = 4.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 430 PKVYGCNLCSAQYKNAQELRAH 495
P + C LC A Y + LR H
Sbjct: 521 PGRFECPLCRATYTRSDNLRTH 542
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 23.4 bits (48), Expect = 6.4
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 256 SKSGDDSDYEPIISEIMVSIEVDEYDEEPLDFSIKKEDKPATSKRRRNDKCRKSKE 423
S++ DD DY V DE D DFSI + D+P + K K ++
Sbjct: 36 SETADDGDY--------VQKNDDEEDIVDSDFSIDENDEPISDAEEEPAKGSKRRK 83
>AF203335-1|AAF19830.1| 175|Anopheles gambiae immune-responsive
serine protease-relatedprotein ISPR20 protein.
Length = 175
Score = 23.4 bits (48), Expect = 6.4
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 451 LCSAQYKNAQELRAHSLEHQVKTRHKCDEC 540
+C QY+ + +HS + + RH D+C
Sbjct: 17 ICVYQYQCTDGVVSHSGANIIDIRHPLDDC 46
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,163
Number of Sequences: 2352
Number of extensions: 12039
Number of successful extensions: 39
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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