Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17b18
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical p...   126   1e-29
Z35639-2|CAA84694.1|  351|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm recept...    28   7.3  

>Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical
           protein F22D6.3a protein.
          Length = 545

 Score =  126 bits (305), Expect = 1e-29
 Identities = 68/156 (43%), Positives = 95/156 (60%)
 Frame = +1

Query: 220 KPFKTILKAMHHAGQEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDXXXX 399
           +P  T+++AM    +     +     ++ + ++ AAK+ +KK  K +  E  K       
Sbjct: 21  QPLATLVQAML-ISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAEVKKLEKAGCR 79

Query: 400 XXXXXXXRSQNLDEAKKILLQEDPSLPKATVVKICESTEHRGQRICIRGWVHRLRRQGKS 579
                  +   L+EAKKI    D SLP+A V+KI ES +HR QR+ I+ WVHRLRRQGKS
Sbjct: 80  EKEAEEAQHAALEEAKKITFSLDKSLPEAKVIKIGESVQHRDQRVSIKAWVHRLRRQGKS 139

Query: 580 LAFLTLRDGTGYLQCVLHGILCQTYNALVLSTESSV 687
           L FL LRDG G+LQCVL+  LCQ+Y+A+ LSTE+SV
Sbjct: 140 LMFLVLRDGYGFLQCVLNDKLCQSYDAVTLSTETSV 175


>Z35639-2|CAA84694.1|  351|Caenorhabditis elegans Hypothetical
           protein D2045.5 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 259 GQEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIW 360
           G+E F  + +  K    DY VA K Q+ K  KIW
Sbjct: 305 GEEMFTALSISEKRAPNDYKVATKMQMAK--KIW 336


>U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical
           protein C28F5.4 protein.
          Length = 856

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 220 KPFKTILKAMHHAGQEPFPTIYVDSKDDTK 309
           K F+T LK  HHA   P    Y+ SK D K
Sbjct: 411 KNFETALKTSHHAFNLPEKNEYIPSKFDQK 440


>U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm receptor
           protein 136 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -3

Query: 462 LQENLLCLI*VLRSLFIVLLFCLSFVHRLIVLADPNLLDFLQLRFCCYIIILSVI 298
           L E L+CL  VL      LL C  F +R + L   +LL +LQ +    I   SVI
Sbjct: 91  LGEFLVCLHCVLTGFVASLLSC-QFFYRYVALCKTHLLVYLQGKKLFLIFTPSVI 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,163,168
Number of Sequences: 27780
Number of extensions: 296691
Number of successful extensions: 695
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)