Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17b17
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071620-1|AAL49242.1|  474|Drosophila melanogaster RE67111p pro...    29   5.0  
AF181098-1|AAD53186.1|  474|Drosophila melanogaster synaptotagmi...    29   5.0  
AE014297-591|AAF54037.2|  474|Drosophila melanogaster CG10047-PA...    29   5.0  

>AY071620-1|AAL49242.1|  474|Drosophila melanogaster RE67111p
           protein.
          Length = 474

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 251 PSALPPHYLQLLRSSTVRLQRS-LNDLSSLTSTFLNEVGAEYSLVGSGLAMH 99
           PS  PPHYL+   S T   Q   L+ +   +++ + +   +YS  G G A H
Sbjct: 67  PSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQH 118


>AF181098-1|AAD53186.1|  474|Drosophila melanogaster synaptotagmin
           IV protein.
          Length = 474

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 251 PSALPPHYLQLLRSSTVRLQRS-LNDLSSLTSTFLNEVGAEYSLVGSGLAMH 99
           PS  PPHYL+   S T   Q   L+ +   +++ + +   +YS  G G A H
Sbjct: 67  PSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQH 118


>AE014297-591|AAF54037.2|  474|Drosophila melanogaster CG10047-PA
           protein.
          Length = 474

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 251 PSALPPHYLQLLRSSTVRLQRS-LNDLSSLTSTFLNEVGAEYSLVGSGLAMH 99
           PS  PPHYL+   S T   Q   L+ +   +++ + +   +YS  G G A H
Sbjct: 67  PSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQH 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,386,518
Number of Sequences: 53049
Number of extensions: 497362
Number of successful extensions: 1203
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)