Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17b17
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ...    33   0.16 
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    33   0.16 
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    33   0.16 
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ...    33   0.16 
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    33   0.16 
Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U64859-11|AAC69097.2|  337|Caenorhabditis elegans Hypothetical p...    27   7.9  

>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
            protein F33H12.6 protein.
          Length = 1360

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 251  PSALPPHYLQLLRSSTVRLQRSLNDLSSLT--STFLNEVGAEYSL 123
            PS+LPPH L+L + S + L R+L+  + L   S F+ E  A +SL
Sbjct: 1214 PSSLPPHILKLKKGSVIILLRNLDVSAGLCNGSRFIVETLASHSL 1258


>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
            protein ZK250.9 protein.
          Length = 1466

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 251  PSALPPHYLQLLRSSTVRLQRSLNDLSSLT--STFLNEVGAEYSL 123
            PS+LPPH L+L + S + L R+L+  + L   S F+ E  A +SL
Sbjct: 1320 PSSLPPHILKLKKGSVIILLRNLDVSAGLCNGSRFIVETLASHSL 1364


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
            protein Y16E11A.2 protein.
          Length = 1466

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 251  PSALPPHYLQLLRSSTVRLQRSLNDLSSLT--STFLNEVGAEYSL 123
            PS+LPPH L+L + S + L R+L+  + L   S F+ E  A +SL
Sbjct: 1320 PSSLPPHILKLKKGSVIILLRNLDVSAGLCNGSRFIVETLASHSL 1364


>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
            protein Y46B2A.2 protein.
          Length = 1365

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 251  PSALPPHYLQLLRSSTVRLQRSLNDLSSLT--STFLNEVGAEYSL 123
            PS+LPPH L+L + S + L R+L+  + L   S F+ E  A +SL
Sbjct: 1219 PSSLPPHILKLKKGSVIILLRNLDVSAGLCNGSRFIVETLASHSL 1263


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
            protein F59H6.5 protein.
          Length = 1486

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 251  PSALPPHYLQLLRSSTVRLQRSLNDLSSLT--STFLNEVGAEYSL 123
            PS+LPPH L+L + S + L R+L+  + L   S F+ E  A +SL
Sbjct: 1340 PSSLPPHILKLKKGSVIILLRNLDVSAGLCNGSRFIVETLASHSL 1384


>Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical
           protein Y26G10.2 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 449 IYNYFSFLYPNTYFLMSFKT 390
           I+  F+FLYP TY+++ FKT
Sbjct: 26  IFGLFTFLYPLTYYVVLFKT 45


>U64859-11|AAC69097.2|  337|Caenorhabditis elegans Hypothetical
           protein R09F10.8 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 52  YSGKKLPSLVEVRNARCIAKPLPTNEYSAPTSFKKVEVRDDKSF 183
           + GK++PS   +++   +++ L  NE + PT++K   +  D  F
Sbjct: 125 FVGKEIPSNFRMQSNFVVSEGLFANESNIPTTYKLEPISTDSVF 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,375,056
Number of Sequences: 27780
Number of extensions: 267094
Number of successful extensions: 722
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)