Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17b17
(608 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 0.77
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 0.77
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 0.77
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 0.77
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 0.77
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 0.77
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 0.77
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 0.77
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 0.77
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 0.77
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 0.77
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 5.4
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 21 7.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.4
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 94 YNNNYNNYNKHNYNKLYYNI 113
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 327 YNNNYNNYNKHNYNKLYYNI 346
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 252 YMIN*NNCSEHNYKKKHINI 311
Y N NN ++HNY K + NI
Sbjct: 327 YNNNYNNYNKHNYNKLYYNI 346
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 182 SKISGDALWMIAVAVNSVAE 241
SK++ LW + VA++S E
Sbjct: 96 SKVTYSGLWRVCVAISSRME 115
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 443 CK*TCFNKNQVQIEKNIYSNTNQY 514
C +C NK+ + +SN QY
Sbjct: 22 CSYSCVNKSMLNSHLKSHSNVYQY 45
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 109 KPLPTNEYSAPTSFKKVEVRDDKSFKDL 192
KP ++ SAPTS +DK +D+
Sbjct: 591 KPASSSASSAPTSVCSSPRSEDKEVEDM 618
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 152 KKWKLEMINHSKIS 193
K + L M+NHSK S
Sbjct: 481 KDYSLPMVNHSKSS 494
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 452 SIYNYFSFLYPNTYFLM 402
+I++Y P+TYF+M
Sbjct: 135 AIHHYDDIWLPDTYFIM 151
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 452 SIYNYFSFLYPNTYFLM 402
+I++Y P+TYF+M
Sbjct: 135 AIHHYDDIWLPDTYFIM 151
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 452 SIYNYFSFLYPNTYFLM 402
+I++Y P+TYF+M
Sbjct: 186 AIHHYDDIWLPDTYFIM 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 452 SIYNYFSFLYPNTYFLM 402
+I++Y P+TYF+M
Sbjct: 135 AIHHYDDIWLPDTYFIM 151
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 282 HNYKKKHINIAVERSYDVSS 341
+ + ++H + V SYD SS
Sbjct: 28 YKHSRRHRDFTVAESYDASS 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,008
Number of Sequences: 438
Number of extensions: 3745
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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