Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17b02
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.9  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 632 NCCLRFLYSCIHYIICSLLFSIY 564
           N C +FLY+C H  +  ++ S Y
Sbjct: 140 NYC-QFLYNCFHSTLLLMILSRY 161


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 442 AKSIYFGSLRCNSCKASYSSFFFVLYN 362
           A   +FG+  C  CK    SFF   YN
Sbjct: 12  AAGFHFGAFTCEGCK----SFFGRTYN 34


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 40  YFSIYCLPVLLFFNYK 87
           + ++Y LP+L+F+  K
Sbjct: 149 FSALYSLPILIFYEEK 164


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 542  GKALRSHCNKIHCHHWFYSFI*IPRSNLHFKP 447
            GK L S  +   C H  Y F  +  S++  KP
Sbjct: 2338 GKYLPSDIDPSLCTHINYGFAVLDSSSMTLKP 2369


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 444 KQNLYILDHYVVTVVRLHIVP 382
           K NL++LD+ V  ++  +  P
Sbjct: 117 KHNLFLLDNIVKPIIAFYYKP 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,858
Number of Sequences: 336
Number of extensions: 3608
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)