Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc17b02
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093077-1|AAH93077.1| 169|Homo sapiens COMMD2 protein protein. 105 2e-22
BC046131-1|AAH46131.1| 199|Homo sapiens COMM domain containing ... 105 2e-22
AY542158-1|AAS22240.1| 199|Homo sapiens COMMD2 protein. 105 2e-22
AF059618-1|AAG43117.1| 199|Homo sapiens My004 protein protein. 105 2e-22
BC022898-1|AAH22898.1| 195|Homo sapiens COMM domain containing ... 38 0.042
AY542159-1|AAS22241.1| 195|Homo sapiens COMMD3 protein. 38 0.042
AL158211-3|CAI15951.1| 195|Homo sapiens COMM domain containing ... 38 0.042
AF201948-1|AAF17240.1| 195|Homo sapiens PIL protein protein. 38 0.042
CR533452-1|CAG38483.1| 199|Homo sapiens COMMD4 protein. 33 1.2
BC068998-1|AAH68998.1| 199|Homo sapiens COMM domain containing ... 33 1.2
AY542160-1|AAS22242.1| 199|Homo sapiens COMMD4 protein. 33 1.2
BC022046-1|AAH22046.1| 190|Homo sapiens copper metabolism (Murr... 31 2.7
BC009266-1|AAH09266.2| 186|Homo sapiens COMMD1 protein protein. 31 2.7
AK223607-1|BAD97327.1| 190|Homo sapiens MURR1 variant protein. 31 2.7
AC116652-1|AAY24054.1| 94|Homo sapiens unknown protein. 31 2.7
AB178811-1|BAD18972.1| 190|Homo sapiens MURR1 protein. 31 2.7
X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein. 30 8.3
BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein. 30 8.3
BC035325-1|AAH35325.1| 597|Homo sapiens UTP6, small subunit (SS... 30 8.3
BC015454-1|AAH15454.1| 593|Homo sapiens UTP6 protein protein. 30 8.3
AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor ... 30 8.3
AF334386-1|AAO15382.1| 597|Homo sapiens multiple hat domains pr... 30 8.3
AF244135-1|AAF66244.1| 597|Homo sapiens hepatocellular carcinom... 30 8.3
AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein. 30 8.3
>BC093077-1|AAH93077.1| 169|Homo sapiens COMMD2 protein protein.
Length = 169
Score = 105 bits (251), Expect = 2e-22
Identities = 54/141 (38%), Positives = 85/141 (60%)
Frame = +3
Query: 87 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 266
K+HL L + V+ +F ++AVE++ +GAN Y AA KL V T+++ V+ L YL+
Sbjct: 10 KEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHGVEGLTYLL 69
Query: 267 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 446
E SK +SE DF+ S+ + GFS + ++ +LY +KE+ L L + P Y + W
Sbjct: 70 TESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTLLSELAPSLPSYHNLEW 129
Query: 447 RFEVQIASRNSNEGIKPVVTM 509
R +VQ+ASR+ + IKP VT+
Sbjct: 130 RLDVQLASRSLRQQIKPAVTI 150
>BC046131-1|AAH46131.1| 199|Homo sapiens COMM domain containing 2
protein.
Length = 199
Score = 105 bits (251), Expect = 2e-22
Identities = 54/141 (38%), Positives = 85/141 (60%)
Frame = +3
Query: 87 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 266
K+HL L + V+ +F ++AVE++ +GAN Y AA KL V T+++ V+ L YL+
Sbjct: 10 KEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHGVEGLTYLL 69
Query: 267 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 446
E SK +SE DF+ S+ + GFS + ++ +LY +KE+ L L + P Y + W
Sbjct: 70 TESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTLLSELAPSLPSYHNLEW 129
Query: 447 RFEVQIASRNSNEGIKPVVTM 509
R +VQ+ASR+ + IKP VT+
Sbjct: 130 RLDVQLASRSLRQQIKPAVTI 150
>AY542158-1|AAS22240.1| 199|Homo sapiens COMMD2 protein.
Length = 199
Score = 105 bits (251), Expect = 2e-22
Identities = 54/141 (38%), Positives = 85/141 (60%)
Frame = +3
Query: 87 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 266
K+HL L + V+ +F ++AVE++ +GAN Y AA KL V T+++ V+ L YL+
Sbjct: 10 KEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHGVEGLTYLL 69
Query: 267 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 446
E SK +SE DF+ S+ + GFS + ++ +LY +KE+ L L + P Y + W
Sbjct: 70 TESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTLLSELAPSLPSYHNLEW 129
Query: 447 RFEVQIASRNSNEGIKPVVTM 509
R +VQ+ASR+ + IKP VT+
Sbjct: 130 RLDVQLASRSLRQQIKPAVTI 150
>AF059618-1|AAG43117.1| 199|Homo sapiens My004 protein protein.
Length = 199
Score = 105 bits (251), Expect = 2e-22
Identities = 54/141 (38%), Positives = 85/141 (60%)
Frame = +3
Query: 87 KDHLKLLHEHSVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLI 266
K+HL L + V+ +F ++AVE++ +GAN Y AA KL V T+++ V+ L YL+
Sbjct: 10 KEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHGVEGLTYLL 69
Query: 267 LEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAW 446
E SK +SE DF+ S+ + GFS + ++ +LY +KE+ L L + P Y + W
Sbjct: 70 TESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEW 129
Query: 447 RFEVQIASRNSNEGIKPVVTM 509
R +VQ+ASR+ + IKP VT+
Sbjct: 130 RLDVQLASRSLRQQIKPAVTI 150
>BC022898-1|AAH22898.1| 195|Homo sapiens COMM domain containing 3
protein.
Length = 195
Score = 37.5 bits (83), Expect = 0.042
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 264 ILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFA 443
ILE KH +S + L F ++ ++ Y K L L + R+ P D +
Sbjct: 70 ILEAGKHRADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVS 129
Query: 444 WRFEVQIASRNSNEGIKP 497
WR E QI + + +P
Sbjct: 130 WRLEYQIKTNQLHRMYRP 147
>AY542159-1|AAS22241.1| 195|Homo sapiens COMMD3 protein.
Length = 195
Score = 37.5 bits (83), Expect = 0.042
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 264 ILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFA 443
ILE KH +S + L F ++ ++ Y K L L + R+ P D +
Sbjct: 70 ILEAGKHRADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVS 129
Query: 444 WRFEVQIASRNSNEGIKP 497
WR E QI + + +P
Sbjct: 130 WRLEYQIKTNQLHRMYRP 147
>AL158211-3|CAI15951.1| 195|Homo sapiens COMM domain containing 3
protein.
Length = 195
Score = 37.5 bits (83), Expect = 0.042
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 264 ILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFA 443
ILE KH +S + L F ++ ++ Y K L L + R+ P D +
Sbjct: 70 ILEAGKHRADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVS 129
Query: 444 WRFEVQIASRNSNEGIKP 497
WR E QI + + +P
Sbjct: 130 WRLEYQIKTNQLHRMYRP 147
>AF201948-1|AAF17240.1| 195|Homo sapiens PIL protein protein.
Length = 195
Score = 37.5 bits (83), Expect = 0.042
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 264 ILEGSKHNLSESDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFA 443
ILE KH +S + L F ++ ++ Y K L L + R+ P D +
Sbjct: 70 ILEAGKHRADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVS 129
Query: 444 WRFEVQIASRNSNEGIKP 497
WR E QI + + +P
Sbjct: 130 WRLEYQIKTNQLHRMYRP 147
>CR533452-1|CAG38483.1| 199|Homo sapiens COMMD4 protein.
Length = 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/129 (17%), Positives = 51/129 (39%)
Frame = +3
Query: 117 SVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLSE 296
SV++ + ++ E + +G + K K ++ V L +++ +KH++
Sbjct: 27 SVKLRLLCSQVLKELLGQGIDYEKILKLTADAKFESGDVKATVAVLSFILSSAAKHSVDG 86
Query: 297 SDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRN 476
S L G + + + Y K+ L + L++ + WR + ++S
Sbjct: 87 ESLSSELQQLGLPKEHAASLCRCYEEKQSPLQKHLRVCSLRMNRLAGVGWRVDYTLSSSL 146
Query: 477 SNEGIKPVV 503
+P+V
Sbjct: 147 LQSVEEPMV 155
>BC068998-1|AAH68998.1| 199|Homo sapiens COMM domain containing 4
protein.
Length = 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/129 (17%), Positives = 51/129 (39%)
Frame = +3
Query: 117 SVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLSE 296
SV++ + ++ E + +G + K K ++ V L +++ +KH++
Sbjct: 27 SVKLRLLCSQVLKELLGQGIDYEKILKLTADAKFESGDVKATVAVLSFILSSAAKHSVDG 86
Query: 297 SDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRN 476
S L G + + + Y K+ L + L++ + WR + ++S
Sbjct: 87 ESLSSELQQLGLPKEHAASLCRCYEEKQSPLQKHLRVCSLRMNRLAGVGWRVDYTLSSSL 146
Query: 477 SNEGIKPVV 503
+P+V
Sbjct: 147 LQSVEEPMV 155
>AY542160-1|AAS22242.1| 199|Homo sapiens COMMD4 protein.
Length = 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/129 (17%), Positives = 51/129 (39%)
Frame = +3
Query: 117 SVQVLIDFCKLAVEYINKGANSNKYGIAAEKLKVPLATIRNLVQALVYLILEGSKHNLSE 296
SV++ + ++ E + +G + K K ++ V L +++ +KH++
Sbjct: 27 SVKLRLLCSQVLKELLGQGIDYEKILKLTADAKFESGDVKATVAVLSFILSSAAKHSVDG 86
Query: 297 SDFRSSLALAGFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRN 476
S L G + + + Y K+ L + L++ + WR + ++S
Sbjct: 87 ESLSSELQQLGLPKEHAASLCRCYEEKQSPLQKHLRVCSLRMNRLAGVGWRVDYTLSSSL 146
Query: 477 SNEGIKPVV 503
+P+V
Sbjct: 147 LQSVEEPMV 155
>BC022046-1|AAH22046.1| 190|Homo sapiens copper metabolism (Murr1)
domain containing 1 protein.
Length = 190
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 327 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 506
G ++DQ V+SK + + K ++ E+L R + +WR + + SR+S + PV
Sbjct: 85 GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 144
Query: 507 MD 512
++
Sbjct: 145 IE 146
>BC009266-1|AAH09266.2| 186|Homo sapiens COMMD1 protein protein.
Length = 186
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 327 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 506
G ++DQ V+SK + + K ++ E+L R + +WR + + SR+S + PV
Sbjct: 81 GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 140
Query: 507 MD 512
++
Sbjct: 141 IE 142
>AK223607-1|BAD97327.1| 190|Homo sapiens MURR1 variant protein.
Length = 190
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 327 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 506
G ++DQ V+SK + + K ++ E+L R + +WR + + SR+S + PV
Sbjct: 85 GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 144
Query: 507 MD 512
++
Sbjct: 145 IE 146
>AC116652-1|AAY24054.1| 94|Homo sapiens unknown protein.
Length = 94
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 327 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 506
G ++DQ V+SK + + K ++ E+L R + +WR + + SR+S + PV
Sbjct: 25 GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 84
Query: 507 MD 512
++
Sbjct: 85 IE 86
>AB178811-1|BAD18972.1| 190|Homo sapiens MURR1 protein.
Length = 190
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 327 GFSNDQQDVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNEGIKPVVT 506
G ++DQ V+SK + + K ++ E+L R + +WR + + SR+S + PV
Sbjct: 85 GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 144
Query: 507 MD 512
++
Sbjct: 145 IE 146
>X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein.
Length = 2135
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 348 DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWR 449
D +S+ +LY+ + L QR DP+ +D WR
Sbjct: 1775 DTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWR 1808
>BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein.
Length = 2135
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 348 DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWR 449
D +S+ +LY+ + L QR DP+ +D WR
Sbjct: 1775 DTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWR 1808
>BC035325-1|AAH35325.1| 597|Homo sapiens UTP6, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 597
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 378 KKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNE 485
+KE+Y+ LQ L +DP D+ R E++I S+ +
Sbjct: 256 QKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQ 291
>BC015454-1|AAH15454.1| 593|Homo sapiens UTP6 protein protein.
Length = 593
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 378 KKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNE 485
+KE+Y+ LQ L +DP D+ R E++I S+ +
Sbjct: 252 QKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQ 287
>AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor
protein.
Length = 1952
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 348 DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWR 449
D +S+ +LY+ + L QR DP+ +D WR
Sbjct: 1592 DTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWR 1625
>AF334386-1|AAO15382.1| 597|Homo sapiens multiple hat domains
protein.
Length = 597
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 378 KKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNE 485
+KE+Y+ LQ L +DP D+ R E++I S+ +
Sbjct: 256 QKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQ 291
>AF244135-1|AAF66244.1| 597|Homo sapiens hepatocellular
carcinoma-associated antigen 66 protein.
Length = 597
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 378 KKELYEALQLLQRNDPKYIDFAWRFEVQIASRNSNE 485
+KE+Y+ LQ L +DP D+ R E++I S+ +
Sbjct: 256 QKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQ 291
>AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein.
Length = 2143
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 348 DVMSKLYNTKKKELYEALQLLQRNDPKYIDFAWR 449
D +S+ +LY+ + L QR DP+ +D WR
Sbjct: 1783 DTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWR 1816
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,642,069
Number of Sequences: 237096
Number of extensions: 1800642
Number of successful extensions: 3522
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3522
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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