Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17a20
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130535-1|AAI30536.1|  867|Homo sapiens C18orf34 protein protein.     31   2.4  
BC091517-1|AAH91517.1|  849|Homo sapiens C18orf34 protein protein.     31   2.4  
AK126038-1|BAC86407.1|  829|Homo sapiens protein ( Homo sapiens ...    31   2.4  
BC033622-1|AAH33622.2|  563|Homo sapiens IMP (inosine monophosph...    29   9.9  
AK131294-1|BAD18464.1|  530|Homo sapiens protein ( Homo sapiens ...    29   9.9  

>BC130535-1|AAI30536.1|  867|Homo sapiens C18orf34 protein protein.
          Length = 867

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +3

Query: 234 IKSKVDEQFDQLEREYSDKID--GFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHDY 407
           + SK +++   L+  Y  K++    H  +    +E    +C+N  +   +  + +    Y
Sbjct: 273 LDSKQNQELQDLKNHYKKKMEVMDLHRKVNEELEEALE-ACENARLKAQQIKEEIDKDIY 331

Query: 408 TDKKSIETYEK--YCLPQLVDKHNDCYVAV 491
            D+K+IE Y++  Y L  L D ++   + V
Sbjct: 332 QDEKTIEAYKREIYQLNSLFDHYSSSVINV 361


>BC091517-1|AAH91517.1|  849|Homo sapiens C18orf34 protein protein.
          Length = 849

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +3

Query: 234 IKSKVDEQFDQLEREYSDKID--GFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHDY 407
           + SK +++   L+  Y  K++    H  +    +E    +C+N  +   +  + +    Y
Sbjct: 273 LDSKQNQELQDLKNHYKKKMEVMDLHRKVNEELEEALE-ACENARLKAQQIKEEIDKDIY 331

Query: 408 TDKKSIETYEK--YCLPQLVDKHNDCYVAV 491
            D+K+IE Y++  Y L  L D ++   + V
Sbjct: 332 QDEKTIEAYKREIYQLNSLFDHYSSSVINV 361


>AK126038-1|BAC86407.1|  829|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44050 fis, clone TESTI4032895. ).
          Length = 829

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +3

Query: 234 IKSKVDEQFDQLEREYSDKID--GFHDNIQYFKDEHYSVSCQNGSVLKSKFAKILKSHDY 407
           + SK +++   L+  Y  K++    H  +    +E    +C+N  +   +  + +    Y
Sbjct: 273 LDSKQNQELQDLKNHYKKKMEVMDLHRKVNEELEEALE-ACENARLKAQQIKEEIDKDIY 331

Query: 408 TDKKSIETYEK--YCLPQLVDKHNDCYVAV 491
            D+K+IE Y++  Y L  L D ++   + V
Sbjct: 332 QDEKTIEAYKREIYQLNSLFDHYSSSVINV 361


>BC033622-1|AAH33622.2|  563|Homo sapiens IMP (inosine
           monophosphate) dehydrogenase 1 protein.
          Length = 563

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -1

Query: 596 VNFVSKRHNNFVTNRVVLKR*HLVAAVLKSRLQHAYRHVAV 474
           V  V K    F+T+ VVL   H V  VL+++++H +  + +
Sbjct: 153 VRKVKKFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPI 193


>AK131294-1|BAD18464.1|  530|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16255 fis, clone HLUNG2015548, highly  similar
           to INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 (EC
           1.1.1.205). ).
          Length = 530

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -1

Query: 596 VNFVSKRHNNFVTNRVVLKR*HLVAAVLKSRLQHAYRHVAV 474
           V  V K    F+T+ VVL   H V  VL+++++H +  + +
Sbjct: 120 VRKVKKFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPI 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,624,997
Number of Sequences: 237096
Number of extensions: 1647720
Number of successful extensions: 11624
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11624
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)