Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17a04
         (304 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.30 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   0.93 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   0.93 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   1.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   6.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       20   6.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   6.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    20   6.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    19   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.30
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +3

Query: 99  FIFSYLFLWKTKHSIDFC-----LRIKFSLFTRXL*RVNLFIYVCLYFLFKXEKGMTCEH 263
           + F   F+  T H + +C     L I +  +   L  V+L + VC+Y+ +       C  
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAF 272

Query: 264 LNNLVHVL 287
           +   +H+L
Sbjct: 273 IIFTMHLL 280


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 0.93
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +3

Query: 156 RIKFSLFTRXL*RVNLFIYVCLYFLFKXEKGMTCEHLNNLVHVLGKE 296
           R+ F LF     + N+ +YV   F+    + +  E+LN +  V+  E
Sbjct: 335 RVPFDLFENKKRKNNIKLYVRRVFIMDNCEELIPEYLNFIKGVVDSE 381


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 0.93
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 45  CNLIQLIPFHKNVSCKTKFIFSYL 116
           C LIQ IP H   S K  FI  ++
Sbjct: 265 CKLIQSIPTHLLDSEKKNFIVDHI 288


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 143 RFLPSHKILFIYKXIVKSQSFYL 211
           ++   H++L  YK I   + FYL
Sbjct: 156 KYRQMHRLLANYKVITSDEFFYL 178


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -1

Query: 292 FPSTWTRLFKCSHVIPF 242
           F   WTR+F     +P+
Sbjct: 302 FTGDWTRVFDDQQKVPY 318


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 181 GYCEESIFLFTCVC 222
           G C + I  F C+C
Sbjct: 81  GTCVDKINAFQCIC 94


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 166 SLYLQGYCEESIFLF 210
           S+Y    C E IFLF
Sbjct: 70  SVYASLLCTEKIFLF 84


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 103 INLVLQETFLWNGIN*IRLQKFY 35
           + +V  ETF+W  I      K Y
Sbjct: 408 VTIVTYETFVWTQIMGAEFFKLY 430


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 109 PIYSYGKLNIASISAFA*NSLYLQGYCEESIFLFTCV 219
           PI++   +N ++I   A   L++      SI  FTC+
Sbjct: 187 PIFAPTMINPSAICESAAQLLFMNVQWVRSIPAFTCL 223


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 130 LNIASISAFA*NSLYLQGYCEESIFLFTCVCIFYSKXK 243
           +NI S+       LYL   C++ +  F  + +  SK K
Sbjct: 197 INIISLVQLWIFQLYLLILCDQILREFDQIVVILSKVK 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,612
Number of Sequences: 336
Number of extensions: 1301
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)