Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17a04
         (304 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2662|AAF55668.1|  270|Drosophila melanogaster CG11626-P...    30   0.49 
BT001615-1|AAN71370.1|  729|Drosophila melanogaster RE34119p pro...    28   2.0  
AF216975-1|AAF34749.1|  857|Drosophila melanogaster l(2)01289 H9...    28   2.0  
AF216973-2|AAF34747.1|  857|Drosophila melanogaster l(2)01289 H9...    28   2.0  
AF216973-1|AAF34746.1| 1703|Drosophila melanogaster l(2)01289 lo...    28   2.0  
AE013599-216|AAM70821.2|  857|Drosophila melanogaster CG9432-PA,...    28   2.0  
AE013599-215|ABI31026.1| 1855|Drosophila melanogaster CG9432-PD,...    28   2.0  
AE013599-214|AAN16126.1| 1703|Drosophila melanogaster CG9432-PB,...    28   2.0  
AE013599-2066|AAM70973.1|  599|Drosophila melanogaster CG30468-P...    26   8.0  

>AE014297-2662|AAF55668.1|  270|Drosophila melanogaster CG11626-PA
           protein.
          Length = 270

 Score = 30.3 bits (65), Expect = 0.49
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -1

Query: 250 IPFSXLNKKYKHT*IKRLTLHNXLVNKENFMRRQKS 143
           +PF   N+ Y+ + +K+L+LH  L +  +F+R QKS
Sbjct: 21  LPFG--NESYRLSNLKQLSLHQSLADLAHFIRHQKS 54


>BT001615-1|AAN71370.1|  729|Drosophila melanogaster RE34119p
           protein.
          Length = 729

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 195 VNLFIYVCLYFLFKXEKGMTCEHLNNLVHVLGKEL 299
           +N   YV ++F    E G TCEH  N +  +  EL
Sbjct: 379 INEHEYVVVFFTGACEPGETCEHTLNALESIDDEL 413


>AF216975-1|AAF34749.1|  857|Drosophila melanogaster l(2)01289 H9
           form protein.
          Length = 857

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 195 VNLFIYVCLYFLFKXEKGMTCEHLNNLVHVLGKEL 299
           +N   YV ++F    E G TCEH  N +  +  EL
Sbjct: 379 INEHEYVVVFFTGPCEPGETCEHTLNALESIDDEL 413


>AF216973-2|AAF34747.1|  857|Drosophila melanogaster l(2)01289 H9
           form protein.
          Length = 857

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 195 VNLFIYVCLYFLFKXEKGMTCEHLNNLVHVLGKEL 299
           +N   YV ++F    E G TCEH  N +  +  EL
Sbjct: 379 INEHEYVVVFFTGPCEPGETCEHTLNALESIDDEL 413


>AF216973-1|AAF34746.1| 1703|Drosophila melanogaster l(2)01289 long
           form protein.
          Length = 1703

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 195 VNLFIYVCLYFLFKXEKGMTCEHLNNLVHVLGKEL 299
           +N   YV ++F    E G TCEH  N +  +  EL
Sbjct: 710 INEHEYVVVFFTGPCEPGETCEHTLNALESIDDEL 744


>AE013599-216|AAM70821.2|  857|Drosophila melanogaster CG9432-PA,
           isoform A protein.
          Length = 857

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 195 VNLFIYVCLYFLFKXEKGMTCEHLNNLVHVLGKEL 299
           +N   YV ++F    E G TCEH  N +  +  EL
Sbjct: 379 INEHEYVVVFFTGPCEPGETCEHTLNALESIDDEL 413


>AE013599-215|ABI31026.1| 1855|Drosophila melanogaster CG9432-PD,
           isoform D protein.
          Length = 1855

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 195 VNLFIYVCLYFLFKXEKGMTCEHLNNLVHVLGKEL 299
           +N   YV ++F    E G TCEH  N +  +  EL
Sbjct: 710 INEHEYVVVFFTGPCEPGETCEHTLNALESIDDEL 744


>AE013599-214|AAN16126.1| 1703|Drosophila melanogaster CG9432-PB,
           isoform B protein.
          Length = 1703

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 195 VNLFIYVCLYFLFKXEKGMTCEHLNNLVHVLGKEL 299
           +N   YV ++F    E G TCEH  N +  +  EL
Sbjct: 710 INEHEYVVVFFTGPCEPGETCEHTLNALESIDDEL 744


>AE013599-2066|AAM70973.1|  599|Drosophila melanogaster CG30468-PA
           protein.
          Length = 599

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 190 HNXLVNKENFMRRQKSMLCLVFHRNK*EKINL 95
           HN  + KENF + +    C +F     EK+NL
Sbjct: 136 HNVAMVKENFYQLEVVYSCRLFQDQNYEKLNL 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,940,857
Number of Sequences: 53049
Number of extensions: 192804
Number of successful extensions: 305
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)