Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc17a02
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    60   8e-11
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       27   0.69 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   3.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   8.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.5  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 59.7 bits (138), Expect = 8e-11
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
 Frame = +3

Query: 258 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 437
           VV  + N+ LI +NRPK  NA+      +L  A+ +F+ D      ++ G   +F +G D
Sbjct: 48  VVEKENNITLIGINRPKVRNAIDSITGRKLSAAIAEFENDPKADVGVLHGIGGSFCSGYD 107

Query: 438 IKEMQNNTYSSNTKQGFLREWEDISN-----CGKPIIAAVNGFALGGGCELAMLCDIIYA 602
           + E+             +   E +         KP++ A+ G+ + GG ELA++CD+   
Sbjct: 108 LSELAGQ-QEPQQALSIVHHPEGVMGPTRRMIRKPLVCAITGYCVAGGLELALMCDLRVM 166

Query: 603 GEKA-------KFGQPEINIGTI 650
            E A       +FG P I+ GT+
Sbjct: 167 EENAVLGFFNRRFGVPLIDGGTV 189


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
 Frame = -2

Query: 343 STNNGLHRAFSAFGRFN*MSPTFFLEPTTSTLMFSYDAVL*NFIDAWLVADTTLHLFSTF 164
           + N+   RA +    F      F L P    ++FS  +VL      +  ADT L LF   
Sbjct: 148 AVNSFYQRANTEIEDFIGEGDVFSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFI 207

Query: 163 FPSKARV-TVATEAILRNMNHQVL 95
                RV T+ T A +R   H  L
Sbjct: 208 NAPTQRVSTMHTTAFVRRCLHNEL 231


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 563  TPKSETINSGNDGLPTVGDVLPF 495
            TP SET+  G    PTV  ++ F
Sbjct: 967  TPTSETVGGGMHRTPTVASMMTF 989


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 113  YEPPSTRIYAILMIRTKAPASMTLVNFDTYAGA 15
            Y+P  +R  AI ++R  AP +  + +  T+A A
Sbjct: 1220 YKPNISREEAIALLRNAAPGTFIVRDSTTFANA 1252



 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 630  RADRISPFRRHR*YRTALPAHNHPQER 550
            R+  +SP R  R Y T      H  ER
Sbjct: 1041 RSQTLSPVRNERNYHTLTTTRTHSTER 1067


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 519 GKPIIAAVNGFALGGGCELAMLCD 590
           GK  I A     +GG C+L   CD
Sbjct: 42  GKSAIVAGIVLGMGGNCKLLSRCD 65


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -1

Query: 476 CVAAVCIVLHLLNISTSRKRLLVTSDDDGSNVAVGVKIIDCLPEFDKQW 330
           CV A  I LHLL    SR      +++   +VA  ++ +  +  + ++W
Sbjct: 810 CVLAGMIPLHLLLDEDSRTFHRRRAENIAGSVARNMERVTTMERWQREW 858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,547
Number of Sequences: 2352
Number of extensions: 14864
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)