Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16p18
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 31 3.8
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 31 3.8
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 31 3.8
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 31 3.8
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 31 3.8
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 31 3.8
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 31 3.8
BC094811-1|AAH94811.1| 602|Homo sapiens ADAMTSL4 protein protein. 30 8.7
BC071852-1|AAH71852.1| 602|Homo sapiens ADAMTSL4 protein protein. 30 8.7
BC027478-1|AAH27478.1| 424|Homo sapiens ADAMTSL4 protein protein. 30 8.7
AY358122-1|AAQ88489.1| 877|Homo sapiens ENWT2803 protein. 30 8.7
AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein. 30 8.7
AL356356-12|CAI15499.1| 877|Homo sapiens ADAMTS-like 4 protein. 30 8.7
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 31.1 bits (67), Expect = 3.8
Identities = 37/163 (22%), Positives = 73/163 (44%)
Frame = +1
Query: 184 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 363
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 364 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 543
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 544 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLXKNVMAYLRDKL 672
Y+ +AL+ C + A++L+R L + L++ L
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 31.1 bits (67), Expect = 3.8
Identities = 37/163 (22%), Positives = 73/163 (44%)
Frame = +1
Query: 184 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 363
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 364 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 543
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 544 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLXKNVMAYLRDKL 672
Y+ +AL+ C + A++L+R L + L++ L
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 31.1 bits (67), Expect = 3.8
Identities = 37/163 (22%), Positives = 73/163 (44%)
Frame = +1
Query: 184 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 363
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 364 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 543
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 544 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLXKNVMAYLRDKL 672
Y+ +AL+ C + A++L+R L + L++ L
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 31.1 bits (67), Expect = 3.8
Identities = 37/163 (22%), Positives = 73/163 (44%)
Frame = +1
Query: 184 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 363
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 364 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 543
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 544 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLXKNVMAYLRDKL 672
Y+ +AL+ C + A++L+R L + L++ L
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 31.1 bits (67), Expect = 3.8
Identities = 37/163 (22%), Positives = 73/163 (44%)
Frame = +1
Query: 184 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 363
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 364 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 543
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 544 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLXKNVMAYLRDKL 672
Y+ +AL+ C + A++L+R L + L++ L
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 31.1 bits (67), Expect = 3.8
Identities = 37/163 (22%), Positives = 73/163 (44%)
Frame = +1
Query: 184 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 363
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 364 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 543
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 544 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLXKNVMAYLRDKL 672
Y+ +AL+ C + A++L+R L + L++ L
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 31.1 bits (67), Expect = 3.8
Identities = 37/163 (22%), Positives = 73/163 (44%)
Frame = +1
Query: 184 GKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDG 363
G+ + KCP +FD+ LG WY +E + E + C++A ++ + +G
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLME-----NG 72
Query: 364 TIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTE 543
I+ +N R AD + + + G T ++L +PA S + +++ T+
Sbjct: 73 KIK-----VLNQELR-ADGTVNQ-IEGEAT-PVNLTEPAKLEVKFSWFMPSAPYWILATD 124
Query: 544 YKTWALLLHCAEQTEGARYLTAFVLSRTTKLXKNVMAYLRDKL 672
Y+ +AL+ C + A++L+R L + L++ L
Sbjct: 125 YENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>BC094811-1|AAH94811.1| 602|Homo sapiens ADAMTSL4 protein protein.
Length = 602
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 230 HTSICPGYWETGMWLSTTR 286
H + CP YWE G W S +R
Sbjct: 247 HGTPCPPYWEAGEWTSCSR 265
>BC071852-1|AAH71852.1| 602|Homo sapiens ADAMTSL4 protein protein.
Length = 602
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 230 HTSICPGYWETGMWLSTTR 286
H + CP YWE G W S +R
Sbjct: 247 HGTPCPPYWEAGEWTSCSR 265
>BC027478-1|AAH27478.1| 424|Homo sapiens ADAMTSL4 protein protein.
Length = 424
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 230 HTSICPGYWETGMWLSTTR 286
H + CP YWE G W S +R
Sbjct: 69 HGTPCPPYWEAGEWTSCSR 87
>AY358122-1|AAQ88489.1| 877|Homo sapiens ENWT2803 protein.
Length = 877
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 230 HTSICPGYWETGMWLSTTR 286
H + CP YWE G W S +R
Sbjct: 719 HGTPCPPYWEAGEWTSCSR 737
>AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein.
Length = 1074
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 230 HTSICPGYWETGMWLSTTR 286
H + CP YWE G W S +R
Sbjct: 719 HGTPCPPYWEAGEWTSCSR 737
>AL356356-12|CAI15499.1| 877|Homo sapiens ADAMTS-like 4 protein.
Length = 877
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 230 HTSICPGYWETGMWLSTTR 286
H + CP YWE G W S +R
Sbjct: 719 HGTPCPPYWEAGEWTSCSR 737
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,011,448
Number of Sequences: 237096
Number of extensions: 2259525
Number of successful extensions: 9130
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9130
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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