Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16p16
         (366 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0699 + 19579713-19580273                                         29   1.5  
09_04_0696 - 19559227-19559622,19559710-19559862,19559957-195607...    27   4.5  
09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468           27   4.5  
04_04_1229 - 31906854-31907300,31907986-31908181,31908631-319087...    27   4.5  
08_02_1523 - 27655507-27655740,27655848-27656003,27656111-276563...    26   7.9  
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574...    26   7.9  

>09_04_0699 + 19579713-19580273
          Length = 186

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 82  REKAEIAYYFKKKSHDAHNSL 20
           +EKA + YY K K+HD + +L
Sbjct: 55  KEKARVDYYHKNKNHDGNKAL 75


>09_04_0696 -
           19559227-19559622,19559710-19559862,19559957-19560784,
           19561727-19561842,19562286-19562319
          Length = 508

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 26/79 (32%), Positives = 35/79 (44%)
 Frame = +3

Query: 15  SFKEL*ASCDFFLK**AISAFSLQSSHIVEGSPSPLRICYNNRHVVLSNVAVNGFDCIKK 194
           SF +   S D F+    +SA   ++  I E +PS LR     RH  L NV + GF  +K 
Sbjct: 363 SFLDACPSLDTFIV--DVSAKHPENDSIFE-NPSHLRQLPEQRHDNLRNVKITGFRSVKS 419

Query: 195 KRCLCAKDNEQK*SKCLPL 251
              L     E    +CL L
Sbjct: 420 LLELTYHILENTSVECLTL 438


>09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468
          Length = 1078

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = -1

Query: 186 YSQNRLLRHCLEQHAGYYNRFAREMDSLLQYVMIAEKRQRLLIISKRNRMTLIT 25
           Y +  ++R+ LE H  YYN+    M  +++       R   L++     MT +T
Sbjct: 479 YYKELIMRNLLEPHDDYYNQEYCLMHDVVRSFAQYVARDEALVVGDTENMTNLT 532


>04_04_1229 -
           31906854-31907300,31907986-31908181,31908631-31908756,
           31909962-31910329,31910680-31910835,31910968-31911168,
           31911230-31911375,31911439-31911865,31912527-31912627,
           31913197-31913254
          Length = 741

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +3

Query: 96  IVEGSPSPLRICYNNRHVVLSNVAVNGFDCIKKKRCLCAKDNEQK*S-KCLPL 251
           I++G  + LR   + RH  L NV + GF+  K    L +   E   S KC+ L
Sbjct: 374 ILDGEHTNLRQILHPRHANLQNVTITGFNSTKSMIELTSHILENAPSLKCITL 426


>08_02_1523 -
           27655507-27655740,27655848-27656003,27656111-27656306,
           27657175-27657224
          Length = 211

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 99  VEGSPSPLRICYNNRHVVLSNVAVNGFDCIK 191
           V G  SPLR    +RH  L +V + GF   K
Sbjct: 145 VLGDSSPLRQMPEHRHCYLKSVKMTGFSSAK 175


>08_02_1236 +
           25454371-25456801,25456891-25457177,25457258-25457416,
           25457561-25457740,25457823-25458017,25459059-25459157,
           25459508-25460137,25460250-25460591
          Length = 1440

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 97  ICDDCREKAEIAYYFKKKSHDAHNSLKDQL 8
           +CDD REK E A   ++ +  AH   ++ L
Sbjct: 908 LCDDYREKLEAARQEERGARTAHGDKRNDL 937


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,768,013
Number of Sequences: 37544
Number of extensions: 160414
Number of successful extensions: 368
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)