Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16p16
         (366 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011709-1|AAH11709.1|  152|Homo sapiens chromosome 6 open readi...    30   2.0  
AL031778-4|CAI20285.1|  152|Homo sapiens protein ( Human DNA seq...    30   2.0  
BC020570-1|AAH20570.1|  341|Homo sapiens calcium binding protein...    29   3.5  
AF151824-1|AAD34061.1|  341|Homo sapiens CGI-66 protein protein.       29   3.5  
AF113536-1|AAF14873.1|  341|Homo sapiens MO25 protein protein.         29   3.5  

>BC011709-1|AAH11709.1|  152|Homo sapiens chromosome 6 open reading
           frame 130 protein.
          Length = 152

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = -3

Query: 121 KGDGLPSTICDDCREKAEIAYYFKKKSHDAHNSLKDQLK 5
           K D L   I +DCR  A IA  FKKK       L  Q K
Sbjct: 26  KTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKK 64


>AL031778-4|CAI20285.1|  152|Homo sapiens protein ( Human DNA
           sequence from clone RP1-34B21 on chromosome 6p12.1-21.1.
           ).
          Length = 152

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = -3

Query: 121 KGDGLPSTICDDCREKAEIAYYFKKKSHDAHNSLKDQLK 5
           K D L   I +DCR  A IA  FKKK       L  Q K
Sbjct: 26  KTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKK 64


>BC020570-1|AAH20570.1|  341|Homo sapiens calcium binding protein 39
           protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = -1

Query: 204 STFFSLYSQNRLLR-HCLEQHAGYYNRFAREMDSLLQYVMIAEKRQRLLIISK----RNR 40
           +TF  L ++++LL    LEQH   Y+RF  E + LL       KRQ L ++ +    R+ 
Sbjct: 186 ATFKDLLTRHKLLSAEFLEQH---YDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHN 242

Query: 39  MTLIT 25
            T++T
Sbjct: 243 FTIMT 247


>AF151824-1|AAD34061.1|  341|Homo sapiens CGI-66 protein protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = -1

Query: 204 STFFSLYSQNRLLR-HCLEQHAGYYNRFAREMDSLLQYVMIAEKRQRLLIISK----RNR 40
           +TF  L ++++LL    LEQH   Y+RF  E + LL       KRQ L ++ +    R+ 
Sbjct: 186 ATFKDLLTRHKLLSAEFLEQH---YDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHN 242

Query: 39  MTLIT 25
            T++T
Sbjct: 243 FTIMT 247


>AF113536-1|AAF14873.1|  341|Homo sapiens MO25 protein protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = -1

Query: 204 STFFSLYSQNRLLR-HCLEQHAGYYNRFAREMDSLLQYVMIAEKRQRLLIISK----RNR 40
           +TF  L ++++LL    LEQH   Y+RF  E + LL       KRQ L ++ +    R+ 
Sbjct: 186 ATFKDLLTRHKLLSAEFLEQH---YDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHN 242

Query: 39  MTLIT 25
            T++T
Sbjct: 243 FTIMT 247


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,553,744
Number of Sequences: 237096
Number of extensions: 907146
Number of successful extensions: 1609
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)