Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16p05
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   190   1e-48
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   190   1e-48
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   159   4e-39
AY752584-1|AAW32030.1|  167|Drosophila melanogaster CG11942 prot...    30   3.5  
AY752583-1|AAW32029.1|  167|Drosophila melanogaster CG11942 prot...    30   3.5  
AY752582-1|AAW32028.1|  167|Drosophila melanogaster CG11942 prot...    30   3.5  
AY752580-1|AAW32026.1|  167|Drosophila melanogaster CG11942 prot...    30   3.5  
AY118279-1|AAM48308.1|  427|Drosophila melanogaster AT13296p pro...    29   8.1  
AY069159-1|AAL39304.1|  440|Drosophila melanogaster GH18255p pro...    29   8.1  
AE014297-798|AAS65126.1|  427|Drosophila melanogaster CG8136-PC,...    29   8.1  
AE014297-797|AAN13398.1|  440|Drosophila melanogaster CG8136-PA,...    29   8.1  
AE014297-796|AAF54275.2|  441|Drosophila melanogaster CG8136-PB,...    29   8.1  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  190 bits (464), Expect = 1e-48
 Identities = 99/200 (49%), Positives = 126/200 (63%)
 Frame = +3

Query: 105 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRT 284
           K P N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RT
Sbjct: 19  KHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERT 78

Query: 285 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 464
           V LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L
Sbjct: 79  VFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 138

Query: 465 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 644
            SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF           
Sbjct: 139 ASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKT 198

Query: 645 XXXEGDDIFATKKEKYVPSE 704
                 DIFA KKE++VP+E
Sbjct: 199 GEA---DIFAAKKERFVPNE 215


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  190 bits (464), Expect = 1e-48
 Identities = 99/200 (49%), Positives = 126/200 (63%)
 Frame = +3

Query: 105 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRT 284
           K P N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RT
Sbjct: 19  KHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERT 78

Query: 285 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 464
           V LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L
Sbjct: 79  VFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 138

Query: 465 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 644
            SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF           
Sbjct: 139 ASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKT 198

Query: 645 XXXEGDDIFATKKEKYVPSE 704
                 DIFA KKE++VP+E
Sbjct: 199 GEA---DIFAAKKERFVPNE 215


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  159 bits (385), Expect = 4e-39
 Identities = 90/200 (45%), Positives = 120/200 (60%)
 Frame = +3

Query: 105 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRT 284
           K P N  L  G++R+SK++M+ ++A Y+               + VV++           
Sbjct: 19  KHPVNSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------K 59

Query: 285 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 464
           VP+K+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L
Sbjct: 60  VPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 119

Query: 465 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 644
            SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF           
Sbjct: 120 ASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKT 179

Query: 645 XXXEGDDIFATKKEKYVPSE 704
                 DIFA KKE++VP+E
Sbjct: 180 GEA---DIFAAKKERFVPNE 196


>AY752584-1|AAW32030.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 514 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPD 341
           G ELK + P  +T    +  +  STTLL   L A+++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 340 EAR 332
           E R
Sbjct: 136 EIR 138


>AY752583-1|AAW32029.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 514 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPD 341
           G ELK + P  +T    +  +  STTLL   L A+++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 340 EAR 332
           E R
Sbjct: 136 EIR 138


>AY752582-1|AAW32028.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 514 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPD 341
           G ELK + P  +T    +  +  STTLL   L A+++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 340 EAR 332
           E R
Sbjct: 136 EIR 138


>AY752580-1|AAW32026.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 514 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPD 341
           G ELK + P  +T    +  +  STTLL   L A+++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 340 EAR 332
           E R
Sbjct: 136 EIR 138


>AY118279-1|AAM48308.1|  427|Drosophila melanogaster AT13296p
           protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 544 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 690
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 92  SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 137


>AY069159-1|AAL39304.1|  440|Drosophila melanogaster GH18255p
           protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 544 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 690
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 105 SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 150


>AE014297-798|AAS65126.1|  427|Drosophila melanogaster CG8136-PC,
           isoform C protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 544 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 690
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 92  SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 137


>AE014297-797|AAN13398.1|  440|Drosophila melanogaster CG8136-PA,
           isoform A protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 544 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 690
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 105 SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 150


>AE014297-796|AAF54275.2|  441|Drosophila melanogaster CG8136-PB,
           isoform B protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 544 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 690
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 106 SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,009,742
Number of Sequences: 53049
Number of extensions: 670040
Number of successful extensions: 1976
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)