Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16o16
(737 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011719-1|AAH11719.1| 400|Homo sapiens transmembrane protein 4... 102 2e-21
BC003125-1|AAH03125.1| 400|Homo sapiens transmembrane protein 4... 99 1e-20
AY358625-1|AAQ88988.1| 400|Homo sapiens MGC32 protein. 99 1e-20
AK027877-1|BAB55425.1| 400|Homo sapiens protein ( Homo sapiens ... 99 1e-20
AK027757-1|BAB55348.1| 400|Homo sapiens protein ( Homo sapiens ... 99 1e-20
AK075010-1|BAC11350.1| 400|Homo sapiens protein ( Homo sapiens ... 98 3e-20
AK074073-1|BAB84899.1| 255|Homo sapiens FLJ00144 protein protein. 93 7e-19
BC008054-1|AAH08054.2| 314|Homo sapiens TMEM43 protein protein. 85 2e-16
BC056146-1|AAH56146.1| 718|Homo sapiens hook homolog 3 (Drosoph... 33 1.1
AK090540-1|BAC03473.1| 373|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF241830-1|AAK29204.1| 718|Homo sapiens golgi-associated microt... 33 1.1
>BC011719-1|AAH11719.1| 400|Homo sapiens transmembrane protein 43
protein.
Length = 400
Score = 102 bits (244), Expect = 2e-21
Identities = 56/169 (33%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +3
Query: 183 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 359
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 360 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 539
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 540 IVDSNLFYIRPGHHNPTSMPLFSETHIAENVRIGWLYLGTDVKRKVNDY 686
I++S F GH+NP++M + S T A V+IG +L + + KV+++
Sbjct: 155 IINSKNFDREIGHNNPSAMAVESFTATAPFVQIGRFFLSSGLIDKVDNF 203
>BC003125-1|AAH03125.1| 400|Homo sapiens transmembrane protein 43
protein.
Length = 400
Score = 99.1 bits (236), Expect = 1e-20
Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +3
Query: 183 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 359
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 360 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 539
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 540 IVDSNLFYIRPGHHNPTSMPLFSETHIAENVRIGWLYLGTDVKRKVNDY 686
I++S F GH NP++M + S A V+IG +L + + KV+++
Sbjct: 155 IINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNF 203
>AY358625-1|AAQ88988.1| 400|Homo sapiens MGC32 protein.
Length = 400
Score = 99.1 bits (236), Expect = 1e-20
Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +3
Query: 183 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 359
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 360 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 539
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 540 IVDSNLFYIRPGHHNPTSMPLFSETHIAENVRIGWLYLGTDVKRKVNDY 686
I++S F GH NP++M + S A V+IG +L + + KV+++
Sbjct: 155 IINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNF 203
>AK027877-1|BAB55425.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ14971 fis, clone THYRO1000570. ).
Length = 400
Score = 99.1 bits (236), Expect = 1e-20
Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +3
Query: 183 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 359
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 360 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 539
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 540 IVDSNLFYIRPGHHNPTSMPLFSETHIAENVRIGWLYLGTDVKRKVNDY 686
I++S F GH NP++M + S A V+IG +L + + KV+++
Sbjct: 155 IINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNF 203
>AK027757-1|BAB55348.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ14851 fis, clone PLACE1000712. ).
Length = 400
Score = 99.1 bits (236), Expect = 1e-20
Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +3
Query: 183 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 359
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 360 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 539
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 540 IVDSNLFYIRPGHHNPTSMPLFSETHIAENVRIGWLYLGTDVKRKVNDY 686
I++S F GH NP++M + S A V+IG +L + + KV+++
Sbjct: 155 IINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNF 203
>AK075010-1|BAC11350.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ90529 fis, clone NT2RP4001879. ).
Length = 400
Score = 97.9 bits (233), Expect = 3e-20
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
Frame = +3
Query: 183 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 359
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 360 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 539
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 540 IVDSNLFYIRPGHHNPTSMPLFSETHIAENVRIGWLYLGTDVKRKVNDY 686
I++S F GH NP++M + S A V+IG +L + KV+++
Sbjct: 155 IINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGPIDKVDNF 203
>AK074073-1|BAB84899.1| 255|Homo sapiens FLJ00144 protein protein.
Length = 255
Score = 93.5 bits (222), Expect = 7e-19
Identities = 45/124 (36%), Positives = 76/124 (61%)
Frame = +3
Query: 315 AKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAE 494
A EG++VHIIG + + +S+P+Y + + AVKLR+ V+MYQW+ ET E + +
Sbjct: 11 APENEGRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQV 69
Query: 495 EYQKTYWYHKDWRDYIVDSNLFYIRPGHHNPTSMPLFSETHIAENVRIGWLYLGTDVKRK 674
+ + Y Y+ +WR I++S F GH+NP++M + S T A V+IG +L + + K
Sbjct: 70 KKETRYSYNTEWRSEIINSKNFDREIGHNNPSAMAVESFTATAPFVQIGRFFLSSGLIDK 129
Query: 675 VNDY 686
V+++
Sbjct: 130 VDNF 133
>BC008054-1|AAH08054.2| 314|Homo sapiens TMEM43 protein protein.
Length = 314
Score = 85.4 bits (202), Expect = 2e-16
Identities = 41/118 (34%), Positives = 71/118 (60%)
Frame = +3
Query: 333 QIVHIIGPIEILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTY 512
++VHIIG + + +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y
Sbjct: 1 RLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRY 59
Query: 513 WYHKDWRDYIVDSNLFYIRPGHHNPTSMPLFSETHIAENVRIGWLYLGTDVKRKVNDY 686
Y+ +WR I++S F GH NP++M + S A V+IG +L + + KV+++
Sbjct: 60 SYNTEWRSEIINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNF 117
>BC056146-1|AAH56146.1| 718|Homo sapiens hook homolog 3
(Drosophila) protein.
Length = 718
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 249 SNLMLEELISAAISIDVHTEDQAKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVK--LR 422
S+L +EEL A + + + Y+ + I L+P ++QA+K L+
Sbjct: 579 SSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQ 638
Query: 423 KRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYH 521
+R +++ +E+ E+ E E+Y + WY+
Sbjct: 639 ERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYN 671
>AK090540-1|BAC03473.1| 373|Homo sapiens protein ( Homo sapiens
cDNA FLJ33221 fis, clone ASTRO2000653, moderately
similar to Homo sapiens hook1 protein (HOOK1) mRNA. ).
Length = 373
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 249 SNLMLEELISAAISIDVHTEDQAKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVK--LR 422
S+L +EEL A + + + Y+ + I L+P ++QA+K L+
Sbjct: 234 SSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQ 293
Query: 423 KRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYH 521
+R +++ +E+ E+ E E+Y + WY+
Sbjct: 294 ERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYN 326
>AF241830-1|AAK29204.1| 718|Homo sapiens golgi-associated
microtubule-binding protein HOOK3 protein.
Length = 718
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 249 SNLMLEELISAAISIDVHTEDQAKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVK--LR 422
S+L +EEL A + + + Y+ + I L+P ++QA+K L+
Sbjct: 579 SSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQ 638
Query: 423 KRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYH 521
+R +++ +E+ E+ E E+Y + WY+
Sbjct: 639 ERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYN 671
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,556,602
Number of Sequences: 237096
Number of extensions: 2135569
Number of successful extensions: 5121
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5113
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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