Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16n16
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   1.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.2  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 139 YLLKRYITLAIIQWRD 92
           Y + RY+ LA+I+W+D
Sbjct: 50  YEVFRYLELAMIRWKD 65


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +1

Query: 355 GINHRLELLCSEGFEFDPNVKDCVPISDYGCTANQXXXXXXIY 483
           G+   ++ + S+G +F  +VK  + ISD     +Q      IY
Sbjct: 764 GVTLVVQEISSDGLKFAFDVKTTLNISDIALYPSQTTHGYDIY 806


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 68  WNASIFKKNYNNVKVASYIE 9
           W A   K    N KV SYI+
Sbjct: 371 WGAECGKYPNGNTKVGSYID 390


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,980
Number of Sequences: 438
Number of extensions: 1763
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)