Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16n08
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023197-1|AAY55613.1|  592|Drosophila melanogaster IP03156p pro...    29   5.6  
AE014297-2276|AAF55366.1|  553|Drosophila melanogaster CG8953-PA...    29   5.6  

>BT023197-1|AAY55613.1|  592|Drosophila melanogaster IP03156p
           protein.
          Length = 592

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 24/78 (30%), Positives = 39/78 (50%)
 Frame = -3

Query: 537 IIFKRIGRTWFKVSRQSGNHPKSKKRRALLDVTPRLTRQLFDFKGSQLTMALWAI*EKEH 358
           I+F R  R  F  S++SGN  +S K   LL    R TR +      +L+M L  +  +E 
Sbjct: 48  ILFTRSLRETFAESQESGNQEQSSKALVLL----RCTRYI-----KRLSMVLTLLETEEG 98

Query: 357 M*RIHLKSLQNSLHTIIF 304
           + +++    Q  + TI+F
Sbjct: 99  LNKVNKTLFQLDVDTILF 116


>AE014297-2276|AAF55366.1|  553|Drosophila melanogaster CG8953-PA
           protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 24/78 (30%), Positives = 39/78 (50%)
 Frame = -3

Query: 537 IIFKRIGRTWFKVSRQSGNHPKSKKRRALLDVTPRLTRQLFDFKGSQLTMALWAI*EKEH 358
           I+F R  R  F  S++SGN  +S K   LL    R TR +      +L+M L  +  +E 
Sbjct: 9   ILFTRSLRETFAESQESGNQEQSSKALVLL----RCTRYI-----KRLSMVLTLLETEEG 59

Query: 357 M*RIHLKSLQNSLHTIIF 304
           + +++    Q  + TI+F
Sbjct: 60  LNKVNKTLFQLDVDTILF 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,222,168
Number of Sequences: 53049
Number of extensions: 539658
Number of successful extensions: 1026
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)