Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16m18
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0155 - 17321982-17322214,17323550-17323590,17323831-173238... 73 1e-13
12_01_0791 + 7234021-7234221,7234801-7234862,7235441-7235481,723... 64 7e-11
11_03_0139 + 10632020-10632211,10632876-10632937,10633141-106331... 62 4e-10
04_03_0855 - 20328695-20328912,20329128-20329168,20329782-203298... 61 6e-10
01_01_0831 + 6493897-6494100,6494195-6494256,6498047-6498087,649... 61 6e-10
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 60 2e-09
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 59 3e-09
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 58 8e-09
12_01_0332 - 2564541-2564758,2564847-2564887,2565138-2565199,256... 57 1e-08
02_04_0085 - 19587026-19587243,19587509-19587549,19587811-195878... 57 1e-08
11_01_0326 - 2435918-2436135,2436232-2436272,2436486-2436547,243... 56 2e-08
05_06_0093 - 25468271-25468320,25468393-25468433,25468592-254686... 56 2e-08
06_03_0423 - 20624149-20624375,20625581-20625621,20625709-206257... 55 4e-08
02_02_0177 + 7484526-7484723,7484913-7484974,7485606-7485646,748... 53 2e-07
01_06_0704 + 31336622-31336825,31336948-31337009,31337040-313371... 44 1e-04
09_04_0714 - 19685374-19685430,19685606-19685669,19686117-196862... 39 0.003
11_06_0690 + 26303733-26306540 31 0.78
05_05_0167 - 22868506-22868580,22868693-22869103 31 0.78
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 30 1.4
04_04_0321 - 24368041-24368091,24368520-24368711 30 1.8
02_02_0590 - 11894721-11895188,11895684-11895851 30 1.8
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 29 3.1
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 29 3.1
01_06_1704 + 39305989-39306186,39306282-39306789,39307094-393071... 29 3.1
07_03_0276 + 16166528-16166796,16166824-16167291,16168048-161684... 27 9.6
01_05_0716 + 24569177-24569462,24569818-24569938,24570033-245700... 27 9.6
01_01_0699 + 5405178-5405356,5405478-5405693,5405808-5405919,540... 27 9.6
>06_03_0155 -
17321982-17322214,17323550-17323590,17323831-17323892,
17324051-17324245
Length = 176
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = +3
Query: 342 QVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMTDP 518
+V+ DV+ P + V++ + ++ G E+ P+ P+V+ + + L MTDP
Sbjct: 12 RVIGDVVDLFVPTTAMSVRFGTK-DLTNGCEIKPSVAAAPPAVQIAGRVNELFALVMTDP 70
Query: 519 DAPSRKEPTFREWHHWLVGNIQ-GNEVNSGETLSQYVGSGPP 641
DAPS EPT REW HWLV NI G + + G+ + Y+G PP
Sbjct: 71 DAPSPSEPTMREWLHWLVVNIPGGTDPSQGDVVVPYMGPRPP 112
>12_01_0791 +
7234021-7234221,7234801-7234862,7235441-7235481,
7235711-7235940
Length = 177
Score = 64.5 bits (150), Expect = 7e-11
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Frame = +3
Query: 309 MSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVK-WDAEP 485
MS +V DV+ A+ L + + E+ G+EL P+QV EP+V+
Sbjct: 1 MSMSRDPLVVGSIVGDVVDHFGASALLRLFYNHREMTSGSELRPSQVAGEPAVQITGGRD 60
Query: 486 GQ-YYTLAMTDPDAPSRKEPTFREWHHWLVGNI-QGNEVNSGETLSQYVGSGP 638
G+ YTL M DPDAPS P+ RE+ HWLV ++ +G + + G + Y P
Sbjct: 61 GRALYTLVMVDPDAPSPSNPSKREYLHWLVTDVPEGGDTSKGTEVVAYESPRP 113
>11_03_0139 +
10632020-10632211,10632876-10632937,10633141-10633181,
10633667-10633883,10634229-10634271
Length = 184
Score = 62.1 bits (144), Expect = 4e-10
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = +3
Query: 345 VVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQ-YYTLAMTDP 518
VV D++ P A L+V Y S E+ G+EL P+QV ++P + + + YTL M DP
Sbjct: 11 VVGDIVDPFVTTASLRVFYNSK-EMTNGSELKPSQVLNQPRIYIEGRDMRTLYTLVMVDP 69
Query: 519 DAPSRKEPTFREWHHWLVGNI-QGNEVNSGETLSQYVGSGP 638
DAPS PT RE+ HW+V +I + + G + Y P
Sbjct: 70 DAPSPSNPTKREYLHWMVTDIPETTDARFGNEIVPYESPRP 110
>04_03_0855 -
20328695-20328912,20329128-20329168,20329782-20329843,
20330023-20330223
Length = 173
Score = 61.3 bits (142), Expect = 6e-10
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Frame = +3
Query: 309 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-E 482
MS V + +V+ +VI P + Y S +V G+EL P+ V +P V+ +
Sbjct: 1 MSRVLEPLVVGKVIGEVIDNFNPTVKMTATYSSNKQVFNGHELFPSAVVSKPRVEVQGGD 60
Query: 483 PGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGP 638
++TL MTDPD P +P RE HW+V +I G + + G + Y P
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPKP 113
>01_01_0831 +
6493897-6494100,6494195-6494256,6498047-6498087,
6498218-6498441
Length = 176
Score = 61.3 bits (142), Expect = 6e-10
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 342 QVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-EPGQYYTLAMTD 515
+VV DV+ P L+V Y + EV G EL P+ V D+P V + +YTL M D
Sbjct: 14 RVVGDVVDPFVRRVALRVAYGAR-EVANGCELRPSAVADQPRVAVGGPDMRTFYTLVMVD 72
Query: 516 PDAPSRKEPTFREWHHWLVGNI 581
PDAPS +P RE+ HWLV +I
Sbjct: 73 PDAPSPSDPNLREYLHWLVTDI 94
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +3
Query: 342 QVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQ-YYTLAMTD 515
+VV DV+ + L+V Y S V G EL P+ V +P V+ + +YTL M D
Sbjct: 15 RVVGDVLDAFVRSTNLKVTYGSKT-VSNGCELKPSMVTHQPRVEVGGNDMRTFYTLVMVD 73
Query: 516 PDAPSRKEPTFREWHHWLVGNIQGNEVNS-GETLSQYVGSGP 638
PDAPS +P RE+ HWLV +I G S G+ + Y P
Sbjct: 74 PDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRP 115
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 59.3 bits (137), Expect = 3e-09
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 342 QVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQ-YYTLAMTD 515
++V DV+ P L V Y + + V G EL P+ V +P V + +YTL M D
Sbjct: 14 RIVGDVLDPFVRITNLSVSYGARI-VSNGCELKPSMVTQQPRVVVGGNDMRTFYTLVMVD 72
Query: 516 PDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYV 626
PDAPS P RE+ HWLV +I G +G T Q V
Sbjct: 73 PDAPSPSNPNLREYLHWLVTDIPG---TTGATFGQEV 106
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 57.6 bits (133), Expect = 8e-09
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 321 AKSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYY 497
A S +V+ DV+ +P L+V Y +GV V G +L P+ V PSV+
Sbjct: 4 ANSLVLGRVIGDVVDLFSPEVTLRVMY-NGVRVVNGEDLRPSAVSARPSVE--------- 53
Query: 498 TLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGP 638
M DPDAP+ PT RE+ HWLV +I G + N G + Y P
Sbjct: 54 --VMVDPDAPNPSNPTLREYLHWLVTDIPGTTDANYGREVVCYESPRP 99
>12_01_0332 -
2564541-2564758,2564847-2564887,2565138-2565199,
2565305-2565505
Length = 173
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 309 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-E 482
MS + +V+ +VI P + V Y S V G+E P+ V +P V+ +
Sbjct: 1 MSRSVEPLVVGRVIGEVIDSFNPCTKMIVTYNSNKLVFNGHEFYPSAVVSKPRVEVQGGD 60
Query: 483 PGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGP 638
++TL MTDPD P +P RE HW+V +I G + + G + Y P
Sbjct: 61 MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREIISYESPKP 113
>02_04_0085 -
19587026-19587243,19587509-19587549,19587811-19587872,
19587990-19588190
Length = 173
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 309 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-E 482
MS V + +V+ +V+ P + Y + +V G+E P+ V +P V+ +
Sbjct: 1 MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGD 60
Query: 483 PGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGP 638
++TL MTDPD P +P RE HW+V +I G + + G + Y P
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPRP 113
>11_01_0326 -
2435918-2436135,2436232-2436272,2436486-2436547,
2436620-2436820
Length = 173
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 309 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-E 482
MS + +V+ +V+ P + V Y S V G+EL P+ V +P V+ +
Sbjct: 1 MSRSVEPLVVGRVIGEVLDTFNPCMKMIVTYNSNKLVFNGHELYPSAVVSKPRVEVQGGD 60
Query: 483 PGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGP 638
++TL MTDPD P +P RE HW+V +I G + + G + Y P
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVISYESPKP 113
>05_06_0093 -
25468271-25468320,25468393-25468433,25468592-25468653,
25468872-25469057
Length = 112
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +3
Query: 339 SQVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQY-YTLAMT 512
SQ++PDV+ P L+V Y S + + G L P+ V +P V + YTL +
Sbjct: 7 SQIIPDVLDPFISTISLRVTYNSRL-LLAGAALKPSAVVSKPQVDVGGNDMRVSYTLVLV 65
Query: 513 DPDAPSRKEPTFREWHHWLVGNI 581
DPDAPS +P+ RE+ HW+V +I
Sbjct: 66 DPDAPSPSDPSLREYLHWMVTDI 88
>06_03_0423 -
20624149-20624375,20625581-20625621,20625709-20625770,
20626147-20626338
Length = 173
Score = 55.2 bits (127), Expect = 4e-08
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +3
Query: 327 SFEASQVVPDVIPKAPAAL-LQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQY-YT 500
S S +V DV+ + ++ L V Y G V G E + V +P V+ + ++ YT
Sbjct: 5 SLTRSHIVGDVLDQFSNSVPLTVMY-DGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAYT 63
Query: 501 LAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNS-GETLSQYVGSGP 638
L M DPDAP+ PT RE+ HW+V +I + +S G + Y P
Sbjct: 64 LVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSP 110
>02_02_0177 +
7484526-7484723,7484913-7484974,7485606-7485646,
7485845-7486101
Length = 185
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +3
Query: 327 SFEASQVVPDVI-PKAPAALLQVKY-PSGVEVKEGNELTPTQVKDEPSVKWDAEPGQY-Y 497
S +V+ DV+ P L V Y G+ V G EL V ++P V+ + + Y
Sbjct: 5 SLATGRVIGDVLDPFISTVDLTVMYGDDGMPVISGVELRAPAVAEKPVVEVGGDDLRVAY 64
Query: 498 TLAMTDPDAPSRKEPTFREWHHWLVGNIQGN-EVNSGETLSQYVGSGP 638
TL M DPDAP+ PT RE+ HW+V +I + + G + Y P
Sbjct: 65 TLVMVDPDAPNPSNPTLREYLHWMVTDIPASTDATYGREVVCYESPNP 112
>01_06_0704 +
31336622-31336825,31336948-31337009,31337040-31337171,
31337304-31337341,31337825-31337872,31338545-31338780
Length = 239
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 339 SQVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVK-WDAEPGQYYTLAMT 512
+ V+ DV+ P P L++ Y + + G EL P+ +P V + +YTL +
Sbjct: 13 AHVIHDVLDPFRPTMPLRITYNDRL-LLAGAELKPSATVHKPRVDIGGTDLRVFYTLVLV 71
Query: 513 DPDAPSRKEPTFREWHHWLVG 575
DPDAPS P+ E+ H+L G
Sbjct: 72 DPDAPSPSNPSLGEYLHYLSG 92
>09_04_0714 -
19685374-19685430,19685606-19685669,19686117-19686256,
19687916-19687969,19688407-19688451,19689480-19689517,
19689713-19689831,19689955-19690016,19691038-19691157
Length = 232
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 411 EVKEGNELTPTQVKDEPSVKWDA-EPGQYYTLAMTDPDAPSRKEPTFREWHH 563
E+ G + + V P V+ + + + YTL M DPDAPS +P +RE+ H
Sbjct: 9 EITNGTGVRSSAVFTAPHVEIEGRDQTKLYTLVMVDPDAPSPSKPEYREYLH 60
>11_06_0690 + 26303733-26306540
Length = 935
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 333 EASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEP 485
EA+ VV +P APA +++ GV EG E + K + S A+P
Sbjct: 139 EAAAVVAAAVPPAPAPTREIRAREGVGQAEGKEKEKEKGKGKVSAPSSAQP 189
>05_05_0167 - 22868506-22868580,22868693-22869103
Length = 161
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 459 PSVKWDAEPGQYYTLAMT--DPDAPSRKEPTFREWHHWLVGNI 581
P V+W P +LA+ D DAP P W HW+V NI
Sbjct: 37 PPVEWYGVPDGTRSLALVVHDVDAPDPDGPIV-PWTHWVVANI 78
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 339 SQVVPDVIPKAP--AALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMT 512
S+ P PKAP AA + PS V TPT+V E VK P +
Sbjct: 36 SKPTPRRKPKAPPVAAPMSPVTPSSVRRSSRLLETPTKVTSETPVKPTPTPKRKRAAPSP 95
Query: 513 DPDAPSRKEP 542
P P++ EP
Sbjct: 96 SPKTPTQSEP 105
>04_04_0321 - 24368041-24368091,24368520-24368711
Length = 80
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 345 VVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVK 470
VV D++ P +A L+V Y + E+ G+EL P+QV +EP ++
Sbjct: 11 VVGDILDPFNKSASLKVLY-NNKELTNGSELKPSQVANEPRIE 52
>02_02_0590 - 11894721-11895188,11895684-11895851
Length = 211
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 390 VKYPSGVEVKEGNELTPTQVKDEP 461
++ P ++V+ GN+LTPT V ++P
Sbjct: 71 IQSPINLQVEHGNDLTPTSVSEKP 94
>10_02_0167 -
6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = -1
Query: 240 SRKVFASAGSLRRLRNFLPTATKTALAQSLLLPILDYADSSYPDL 106
S ++A+ L N+LPTA K + A+S L+ + Y+ SS+ DL
Sbjct: 214 STVLYAAGADDNALANYLPTALKGS-ARSWLMHLPPYSISSWADL 257
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -1
Query: 240 SRKVFASAGSLRRLRNFLPTATKTALAQSLLLPILDYADSSYPDL 106
S ++A+ L N+LPTA K A+S L+ + Y+ SS+ DL
Sbjct: 464 STVLYAAGADDNALANYLPTALK-GYARSWLMHLPPYSISSWADL 507
>01_06_1704 +
39305989-39306186,39306282-39306789,39307094-39307137,
39307243-39307398,39307431-39307549,39308176-39308950
Length = 599
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 608 FAGVYLVALDVANQPVV-PFAKCGFFTGRRIRVGHGQSVVLSW 483
+AG+YLVAL +P++ PF F G + G QS +W
Sbjct: 86 YAGMYLVALGGVLEPIMAPFGADQFDDGEDDQRGRRQSSFFNW 128
>07_03_0276 +
16166528-16166796,16166824-16167291,16168048-16168414,
16168565-16168587,16170094-16170385
Length = 472
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 578 VANQPVVPFAKCGFFTGRRIRVGHGQSV 495
V +QPVVPF FF+ + RV + + V
Sbjct: 65 VQSQPVVPFVGMEFFSDKEARVYYNRKV 92
>01_05_0716 +
24569177-24569462,24569818-24569938,24570033-24570082,
24570203-24570270,24570499-24570597,24570688-24570747,
24570863-24570922,24571075-24571129,24571217-24571266,
24571314-24571352
Length = 295
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 402 SGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMTDPDAPSRKEP 542
S ++V G +T + V D S D EP YY + S EP
Sbjct: 206 SSLKVTTGQRMTESSVLDAHSSDVDGEPYWYYEYLVRKSPTQSAPEP 252
>01_01_0699 +
5405178-5405356,5405478-5405693,5405808-5405919,
5406335-5406397,5406468-5406606,5406822-5406877,
5408088-5408161,5408270-5408417,5408505-5408678,
5408809-5408896,5408996-5409109,5409728-5409825,
5409927-5410017,5410440-5410534,5410672-5410825,
5410864-5410876,5411276-5411384
Length = 640
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 574 PTSQWCHSRNVGSLRDGASGSVMAR 500
P S CH VGS DGA+ S A+
Sbjct: 107 PASSVCHEHVVGSFNDGATVSEFAK 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,813,885
Number of Sequences: 37544
Number of extensions: 424032
Number of successful extensions: 1092
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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