Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16m16
         (402 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    23   5.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   7.3  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         22   9.6  

>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 304 SLLLRVVVSCNVLVGLCLV*HQYSLP 227
           +LLLRV V+C  ++ L  V  Q + P
Sbjct: 2   ALLLRVTVACGAVLALVTVRGQAANP 27


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 303 DCLYQWRRNCLVPILFSYY 359
           DC+Y  RRN + P    YY
Sbjct: 471 DCVYIDRRNSIFPEEHRYY 489


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 144 SCRYKLSRSFRTHCCC 191
           SC+   S SF   CCC
Sbjct: 54  SCKQSTSLSFVFLCCC 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,595
Number of Sequences: 2352
Number of extensions: 5201
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)