Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16m14
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058343-1|AAL13572.1|  403|Drosophila melanogaster GH11867p pro...    31   1.4  
AE014297-1960|AAN13634.1|  403|Drosophila melanogaster CG31344-P...    31   1.4  
AE014296-580|AAN11538.2|  457|Drosophila melanogaster CG32281-PA...    31   1.4  

>AY058343-1|AAL13572.1|  403|Drosophila melanogaster GH11867p
           protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 466 RQSVFFVHKTRHVRAICQRMQKSNHRIAPRGSR--ARVEYFERAMQRFLHRC*RK 624
           + S  F    R+VR I       NH IA RGSR    +    RA  R  H C R+
Sbjct: 124 QSSTAFTAYRRYVRTIFHTQAWYNHNIADRGSRFWTSIAAVRRAHSRSSHACARQ 178


>AE014297-1960|AAN13634.1|  403|Drosophila melanogaster CG31344-PA
           protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 466 RQSVFFVHKTRHVRAICQRMQKSNHRIAPRGSR--ARVEYFERAMQRFLHRC*RK 624
           + S  F    R+VR I       NH IA RGSR    +    RA  R  H C R+
Sbjct: 124 QSSTAFTAYRRYVRTIFHTQAWYNHNIADRGSRFWTSIAAVRRAHSRSSHACARQ 178


>AE014296-580|AAN11538.2|  457|Drosophila melanogaster CG32281-PA
           protein.
          Length = 457

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = +2

Query: 371 LLRTDYKNESDVINENNLITQIFXQFFYNLIC-DKAYSLYTKRDMCVPFVKECKKATIGL 547
           +LR    N   V+N+ + I   +  F   LIC D  Y + TK +  VPF  +  K     
Sbjct: 176 VLRDKLPNCRTVVNKASSIDNTYRNFQLELICGDPDYQVETKEN-GVPFEFDFSKVYWNP 234

Query: 548 R-QEDHERVLSILNA 589
           R   +HER++ +L +
Sbjct: 235 RLSTEHERIVKMLKS 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,095,500
Number of Sequences: 53049
Number of extensions: 561777
Number of successful extensions: 1509
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)