Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16m14
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81542-3|CAB04415.1|  308|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL132952-14|CAB63386.1|  257|Caenorhabditis elegans Hypothetical...    28   5.1  
AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z81542-3|CAB04415.1|  308|Caenorhabditis elegans Hypothetical
           protein F49A5.4 protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 304 LVEGAQRGRQVSAFALETLNFVCGLARLTHD 212
           +  G Q G+  SA   ET++FVC L    +D
Sbjct: 157 MTNGTQAGKWASASCTETMSFVCELPATIYD 187


>AL132952-14|CAB63386.1|  257|Caenorhabditis elegans Hypothetical
           protein Y51H4A.23 protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 455 NLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHERVLSILNAQ 592
           NL  DK + +     MC PF+K   ++ I +R    E+ LS +  Q
Sbjct: 69  NLNSDKKWYITYFEFMCNPFIKYMDESLISIRDVATEKFLSTMRDQ 114


>AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical
           protein E02H9.6 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/65 (21%), Positives = 31/65 (47%)
 Frame = +2

Query: 404 VINENNLITQIFXQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHERVLSIL 583
           +IN  NL   ++ +  YNL+C    S+Y K+D  +   K  +   +  +  ++ ++    
Sbjct: 361 LINGINLQRTVYSKIIYNLLC----SIYHKKDKYLKETKNLELKNLNSKNFENSKIKKNS 416

Query: 584 NAQCN 598
             +C+
Sbjct: 417 ELRCS 421


>AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical
           protein W09B6.1b protein.
          Length = 813

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 120 TSSSNKCPNLGPLCNTCKHITIRRRHPT 203
           T  +++   +  +C+T KH+TIR   PT
Sbjct: 496 TRGTSRTEAMNTMCSTLKHMTIRSSFPT 523


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 120 TSSSNKCPNLGPLCNTCKHITIRRRHPT 203
           T  +++   +  +C+T KH+TIR   PT
Sbjct: 496 TRGTSRTEAMNTMCSTLKHMTIRSSFPT 523


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,685,505
Number of Sequences: 27780
Number of extensions: 296259
Number of successful extensions: 962
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)