Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16m14
(657 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 2.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.6
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 3.4
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 4.5
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 4.5
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 5.9
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 7.8
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 29 IVSIKSSFENQANNTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S S+ NN N +N N ++ +I+QVP
Sbjct: 81 IISSLSNKTIHNNNNYNNNNYNNYKKLYYNINYIEQVP 118
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 353
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 142
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 353
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 266 CRYLASSLSTLDEGLQN 316
C+ +ASS+S +EGL N
Sbjct: 595 CKVIASSVSAGEEGLGN 611
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 594 HCAFKILNTRS*SSWRNPMVAFLHSLT 514
H F I NT NPM+A L +L+
Sbjct: 175 HVQFLITNTSGPGVVSNPMIAELETLS 201
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 594 HCAFKILNTRS*SSWRNPMVAFLHSLT 514
H F I NT NPM+A L +L+
Sbjct: 175 HVQFLITNTSGPGVVSNPMIAELETLS 201
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.8 bits (44), Expect = 5.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 141 PNLGPLCNTCKHI 179
P+ P+CN CK +
Sbjct: 29 PSKEPICNICKRV 41
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 65 NNTDNIHNVKNIFSIFLRDEFIKQVP 142
NN N +N N ++ +I+Q+P
Sbjct: 95 NNNYNNYNKHNYNKLYYNINYIEQIP 120
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,061
Number of Sequences: 438
Number of extensions: 3493
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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