Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16l24
(712 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein. 297 2e-80
BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein. 297 2e-80
AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens ... 297 2e-80
AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein. 297 2e-80
AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein. 294 2e-79
BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein. 258 1e-68
AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens ... 32 2.3
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 32 2.3
BC130605-1|AAI30606.1| 110|Homo sapiens late cornified envelope... 31 3.1
BC130603-1|AAI30604.1| 110|Homo sapiens late cornified envelope... 31 3.1
AL139247-4|CAI21682.1| 110|Homo sapiens late cornified envelope... 31 3.1
AL031709-4|CAM26362.1| 1169|Homo sapiens BAI1-associated protein... 31 3.1
EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot... 30 9.4
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot... 30 9.4
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 30 9.4
AF023456-1|AAB82796.1| 753|Homo sapiens protein phosphatase wit... 30 9.4
>BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 297 bits (730), Expect = 2e-80
Identities = 142/212 (66%), Positives = 166/212 (78%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYVYXDTMNLIAKLP 709
S FA+AY++G+ ++KYWE +Y D+M+LIAKLP
Sbjct: 179 SNFARAYAQGISRTKYWELIYEDSMDLIAKLP 210
>BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein.
Length = 466
Score = 297 bits (730), Expect = 2e-80
Identities = 142/212 (66%), Positives = 166/212 (78%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYVYXDTMNLIAKLP 709
S FA+AY++G+ ++KYWE +Y D+M+LIAKLP
Sbjct: 179 SNFARAYAQGISRTKYWELIYEDSMDLIAKLP 210
>AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ90475 fis, clone NT2RP3002721, highly similar to
Porcine citrate synthase mRNA. ).
Length = 466
Score = 297 bits (730), Expect = 2e-80
Identities = 142/212 (66%), Positives = 166/212 (78%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYVYXDTMNLIAKLP 709
S FA+AY++G+ ++KYWE +Y D+M+LIAKLP
Sbjct: 179 SNFARAYAQGISRTKYWELIYEDSMDLIAKLP 210
>AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 297 bits (730), Expect = 2e-80
Identities = 142/212 (66%), Positives = 166/212 (78%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYVYXDTMNLIAKLP 709
S FA+AY++G+ ++KYWE +Y D+M+LIAKLP
Sbjct: 179 SNFARAYAQGISRTKYWELIYEDSMDLIAKLP 210
>AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 294 bits (721), Expect = 2e-79
Identities = 141/212 (66%), Positives = 165/212 (77%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGCIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 SKFAKAYSEGVHKSKYWEYVYXDTMNLIAKLP 709
S FA+AY+ G+ ++KYWE +Y D+++LIAKLP
Sbjct: 179 SNFAQAYARGISRTKYWELIYEDSVDLIAKLP 210
>BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein.
Length = 409
Score = 258 bits (633), Expect = 1e-68
Identities = 118/153 (77%), Positives = 134/153 (87%)
Frame = +2
Query: 251 TKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPE 430
T VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPE
Sbjct: 1 TVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPE 60
Query: 431 GLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNS 610
GLFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNS
Sbjct: 61 GLFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNS 120
Query: 611 ESKFAKAYSEGVHKSKYWEYVYXDTMNLIAKLP 709
ES FA+AY++G+ ++KYWE +Y D+M+LIAKLP
Sbjct: 121 ESNFARAYAQGISRTKYWELIYEDSMDLIAKLP 153
>AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens
cDNA FLJ46675 fis, clone TRACH3009701, weakly similar
to Homo sapiens dynein, axonemal, heavy polypeptide 9
(DNAH9). ).
Length = 901
Score = 31.9 bits (69), Expect = 2.3
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 8 VCDRSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 187
+ R + + LC +R+ L L+R+ + + + A L+ Q L+ +
Sbjct: 123 IIGRVSLAAKSLCMWVRAMELYGRLYRVVEPKRIRMNAALAQLREKQAALAEAQEKLREV 182
Query: 188 LQ--EKIPKE-QEKI---REFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 349
+ E + K+ EK+ E RKK ++ M+ G+ G K WE +V +E
Sbjct: 183 AEKLEMLKKQYDEKLAQKEELRKKSEEMELKLERAGMLVSGLAGEKAR-WEETVQGLEED 241
Query: 350 IRF 358
+ +
Sbjct: 242 LGY 244
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 31.9 bits (69), Expect = 2.3
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 8 VCDRSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 187
+ R + + LC +R+ L L+R+ + + + A L+ Q L+ +
Sbjct: 3222 IIGRVSLAAKSLCMWVRAMELYGRLYRVVEPKRIRMNAALAQLREKQAALAEAQEKLREV 3281
Query: 188 LQ--EKIPKE-QEKI---REFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 349
+ E + K+ EK+ E RKK ++ M+ G+ G K WE +V +E
Sbjct: 3282 AEKLEMLKKQYDEKLAQKEELRKKSEEMELKLERAGMLVSGLAGEKAR-WEETVQGLEED 3340
Query: 350 IRF 358
+ +
Sbjct: 3341 LGY 3343
>BC130605-1|AAI30606.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 537 QC*TICPANCIPCRSSRLPSPHSTVNLNSLKPTQRACTNPSIGSTCT 677
+C CP C P + P+P S + P+ +C PS G C+
Sbjct: 19 KCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSSGGCCS 65
>BC130603-1|AAI30604.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 537 QC*TICPANCIPCRSSRLPSPHSTVNLNSLKPTQRACTNPSIGSTCT 677
+C CP C P + P+P S + P+ +C PS G C+
Sbjct: 19 KCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSSGGCCS 65
>AL139247-4|CAI21682.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 537 QC*TICPANCIPCRSSRLPSPHSTVNLNSLKPTQRACTNPSIGSTCT 677
+C CP C P + P+P S + P+ +C PS G C+
Sbjct: 19 KCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSSGGCCS 65
>AL031709-4|CAM26362.1| 1169|Homo sapiens BAI1-associated protein 3
protein.
Length = 1169
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 570 PCRSSRLPSPHSTVNLNSLKPTQRACTNPSIG 665
PCR S P PH+ V L S P +PS+G
Sbjct: 78 PCRQSPHPGPHTQVPLRSGSPAPPEPVDPSLG 109
>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel protein.
Length = 1998
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel protein.
Length = 2016
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein type
V alpha subunit protein.
Length = 2016
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>AF023456-1|AAB82796.1| 753|Homo sapiens protein phosphatase with
EF-hands-2 long form protein.
Length = 753
Score = 29.9 bits (64), Expect = 9.4
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 47 GSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIR 226
GS R A +K+ + K T T+ R E++ L+++ ++ + +
Sbjct: 516 GSNRGAYVKLGPALTPHIVQYQANKVTHTLTMRQRISRVEESALRALREKLFAHSSDLLS 575
Query: 227 EFRKKHGSTKVGEVTVDMMYGGMRGI--KGLVW 319
EF KKH + KVG +T+ + + GL W
Sbjct: 576 EF-KKHDADKVGLITLSDWAAAVESVLHLGLPW 607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,137,065
Number of Sequences: 237096
Number of extensions: 2163616
Number of successful extensions: 6895
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6894
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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