Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16l21
         (178 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   2.4  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    20   2.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    19   4.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   5.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    18   9.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    18   9.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    18   9.6  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 142 IKKEKSLLYQFLKNDLDHE 86
           ++KE SLLY+ L    D++
Sbjct: 100 LRKEVSLLYRILLGAKDYQ 118


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 98  FGPRMKHKTEISEKLFN 48
           FGP  K + E++EK+ N
Sbjct: 81  FGPVPKFEGEMAEKISN 97


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
 Frame = -1

Query: 139 KKEKSLLYQFLKNDL-----DHE*NIKLKFQK 59
           KKE++ +   L+NDL       + N+ LKF++
Sbjct: 91  KKEENFIVDRLRNDLFECENKEKSNVCLKFEE 122


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/20 (35%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +1

Query: 67   ISVLCFIRGPNH-SLRTDII 123
            + V+C +RG  H S + D++
Sbjct: 1602 VIVICVLRGKGHGSDKDDVV 1621


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 150 ETYKIFRKF 176
           ETY + RKF
Sbjct: 262 ETYNVVRKF 270


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 156 TFLT*SRRRKVYY 118
           TF+   RRR +YY
Sbjct: 222 TFVVIIRRRTLYY 234


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 150 ETYKIFRKF 176
           ETY + RKF
Sbjct: 262 ETYNVVRKF 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,624
Number of Sequences: 438
Number of extensions: 625
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used:  2593980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)