Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16l09
         (173 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   0.45 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   3.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    19   4.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   4.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   5.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 170  FFYSKNLYFSKPRYLRSAYSLKTRTC 93
            F   KN  F KP +  ++Y+L +  C
Sbjct: 1609 FVGPKNCLFRKPEHFVASYALISNQC 1634


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 58  ICLRLNDAIIKRHVLVLS 111
           + L  N+A +K H +VLS
Sbjct: 38  VTLACNEASLKAHKVVLS 55


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 90  FNDGVVKAQTDPFALKRGGHNVQKWTS 10
           F  GV +    P+ ++RG    Q W++
Sbjct: 885 FGQGV-QGMNVPYGMQRGQSGGQTWSN 910


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 1   EGVTGPFLHIMASSLQSKWICLRLNDAI 84
           +GV     H   S  +++++C+   +AI
Sbjct: 175 DGVNDVVQHQSGSEAEAEFVCIATPEAI 202


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 74  TTPSLNDMFSF*ASTQTSNTLALKSI 151
           TTP L   F    S  ++NT++  S+
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNSSL 555


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,559
Number of Sequences: 438
Number of extensions: 602
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used:  2602740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)