Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16k23
(355 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL590438-3|CAH71530.1| 1276|Homo sapiens PR domain containing 16... 28 7.2
AL590438-2|CAH71529.1| 1257|Homo sapiens PR domain containing 16... 28 7.2
AL590438-1|CAH71531.1| 1276|Homo sapiens PR domain containing 16... 28 7.2
AL512383-3|CAH71134.1| 1276|Homo sapiens PR domain containing 16... 28 7.2
AL512383-2|CAH71133.1| 1257|Homo sapiens PR domain containing 16... 28 7.2
AL512383-1|CAH71132.1| 1276|Homo sapiens PR domain containing 16... 28 7.2
AL354743-3|CAI22790.1| 1276|Homo sapiens PR domain containing 16... 28 7.2
AL354743-2|CAI22789.1| 1257|Homo sapiens PR domain containing 16... 28 7.2
AL354743-1|CAI22788.1| 1276|Homo sapiens PR domain containing 16... 28 7.2
AL008733-3|CAI19629.1| 1276|Homo sapiens PR domain containing 16... 28 7.2
AL008733-2|CAI19631.1| 1257|Homo sapiens PR domain containing 16... 28 7.2
AL008733-1|CAI19630.1| 1276|Homo sapiens PR domain containing 16... 28 7.2
AF294278-1|AAG33382.1| 1276|Homo sapiens PR-domain-containing pr... 28 7.2
AB078876-1|BAB84297.1| 1257|Homo sapiens transcription factor ME... 28 7.2
AB051462-1|BAB21766.2| 1286|Homo sapiens KIAA1675 protein protein. 28 7.2
D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein. 28 9.5
BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein. 28 9.5
BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein. 28 9.5
BC062695-1|AAH62695.1| 484|Homo sapiens UBE4A protein protein. 28 9.5
BC052643-1|AAH52643.1| 351|Homo sapiens UBE4A protein protein. 28 9.5
BC030973-1|AAH30973.1| 392|Homo sapiens UBE4A protein protein. 28 9.5
>AL590438-3|CAH71530.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL590438-2|CAH71529.1| 1257|Homo sapiens PR domain containing 16
protein.
Length = 1257
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL590438-1|CAH71531.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL512383-3|CAH71134.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL512383-2|CAH71133.1| 1257|Homo sapiens PR domain containing 16
protein.
Length = 1257
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL512383-1|CAH71132.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL354743-3|CAI22790.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL354743-2|CAI22789.1| 1257|Homo sapiens PR domain containing 16
protein.
Length = 1257
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL354743-1|CAI22788.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL008733-3|CAI19629.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL008733-2|CAI19631.1| 1257|Homo sapiens PR domain containing 16
protein.
Length = 1257
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AL008733-1|CAI19630.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AF294278-1|AAG33382.1| 1276|Homo sapiens PR-domain-containing protein
16 protein.
Length = 1276
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AB078876-1|BAB84297.1| 1257|Homo sapiens transcription factor MEL1
protein.
Length = 1257
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 882 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 940
Query: 305 NIVM 316
+ ++
Sbjct: 941 DPIL 944
>AB051462-1|BAB21766.2| 1286|Homo sapiens KIAA1675 protein protein.
Length = 1286
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 LKTK-LVDSSLMFNSFMCALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 304
LK K L S L+F+ M A+ M + S + + S+LQ + PF++ PPP S
Sbjct: 892 LKEKYLRPSPLLFHPQMSAIETMTEKLESFAA-MKADSGSSLQPLPHHPFNFRSPPPTLS 950
Query: 305 NIVM 316
+ ++
Sbjct: 951 DPIL 954
>D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein.
Length = 1075
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 31 GRVHGLSICQIMLYGYIVCFSY 96
GR+ L +CQI+LY Y+ Y
Sbjct: 287 GRIKDLELCQILLYAYLDILLY 308
>BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein.
Length = 1066
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 31 GRVHGLSICQIMLYGYIVCFSY 96
GR+ L +CQI+LY Y+ Y
Sbjct: 278 GRIKDLELCQILLYAYLDILLY 299
>BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein.
Length = 1066
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 31 GRVHGLSICQIMLYGYIVCFSY 96
GR+ L +CQI+LY Y+ Y
Sbjct: 278 GRIKDLELCQILLYAYLDILLY 299
>BC062695-1|AAH62695.1| 484|Homo sapiens UBE4A protein protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 31 GRVHGLSICQIMLYGYIVCFSY 96
GR+ L +CQI+LY Y+ Y
Sbjct: 278 GRIKDLELCQILLYAYLDILLY 299
>BC052643-1|AAH52643.1| 351|Homo sapiens UBE4A protein protein.
Length = 351
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 31 GRVHGLSICQIMLYGYIVCFSY 96
GR+ L +CQI+LY Y+ Y
Sbjct: 278 GRIKDLELCQILLYAYLDILLY 299
>BC030973-1|AAH30973.1| 392|Homo sapiens UBE4A protein protein.
Length = 392
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 31 GRVHGLSICQIMLYGYIVCFSY 96
GR+ L +CQI+LY Y+ Y
Sbjct: 278 GRIKDLELCQILLYAYLDILLY 299
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,121,452
Number of Sequences: 237096
Number of extensions: 749220
Number of successful extensions: 1439
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -