Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16k06
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH0645... 229 2e-60
AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-P... 229 2e-60
BT001347-1|AAN71102.1| 620|Drosophila melanogaster AT24465p pro... 33 0.38
AY060733-1|AAL28281.1| 513|Drosophila melanogaster GH18278p pro... 33 0.38
AE013599-2779|AAF57630.2| 513|Drosophila melanogaster CG15097-P... 33 0.38
AE013599-2778|AAO41354.1| 617|Drosophila melanogaster CG15097-P... 33 0.38
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro... 31 1.5
AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p pro... 31 1.5
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein. 31 1.5
AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD0556... 31 1.5
AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA... 31 1.5
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P... 31 1.5
AE013599-1738|AAF58362.1| 375|Drosophila melanogaster CG13331-P... 31 2.0
AE013599-1737|AAM68588.1| 430|Drosophila melanogaster CG13331-P... 31 2.0
AE014134-3568|AAN11144.1| 439|Drosophila melanogaster CG31703-P... 29 4.6
AE014134-3567|ABI31337.1| 555|Drosophila melanogaster CG31703-P... 29 4.6
AE014134-3564|AAN11142.1| 441|Drosophila melanogaster CG31702-P... 29 4.6
AY069397-1|AAL39542.1| 669|Drosophila melanogaster LD10094p pro... 29 6.1
AL031863-5|CAA21319.1| 638|Drosophila melanogaster EG:EG0003.6 ... 29 6.1
AJ459408-1|CAD30679.1| 612|Drosophila melanogaster DEK protein ... 29 6.1
AE013599-2360|AAM70892.1| 669|Drosophila melanogaster CG5935-PB... 29 6.1
AE013599-2359|AAS64830.2| 612|Drosophila melanogaster CG5935-PD... 29 6.1
AE013599-2358|AAF57943.2| 663|Drosophila melanogaster CG5935-PA... 29 6.1
AE013599-2357|AAM70891.1| 667|Drosophila melanogaster CG5935-PC... 29 6.1
AE014297-327|AAF51973.2| 648|Drosophila melanogaster CG2179-PB,... 29 8.1
AE014297-326|AAF51972.2| 783|Drosophila melanogaster CG2179-PA,... 29 8.1
AE014134-3563|AAN11141.1| 222|Drosophila melanogaster CG31700-P... 29 8.1
>AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH06451
protein.
Length = 558
Score = 229 bits (561), Expect = 2e-60
Identities = 112/188 (59%), Positives = 139/188 (73%), Gaps = 2/188 (1%)
Frame = +1
Query: 145 VGNLSLSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYVDSKDDT--KDY 318
+ L+L I+TS KPFKTIL+AM HAGKEPFPTIYVD+KD + Y
Sbjct: 6 LAELTLGAIFTSEKKGSDESGDGSESKPFKTILQAMRHAGKEPFPTIYVDTKDPNAAEPY 65
Query: 319 DVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVV 498
+ AAKSQLKKIQK++VRE++K DK + E E+ EKR QNL++A+K+ + EDPSLP A +
Sbjct: 66 EPAAKSQLKKIQKLFVRESHKNADKLQREAEDAEKRQQNLEDARKVKISEDPSLPVARKI 125
Query: 499 KICETTEHRGQRICIRGWVHRLRRQGKSLAFLTLRDGTGYLQCVLHGLLCQTYXALVLST 678
+I E T +R R+ + GWVHRLRRQGKSL F+TLRDGTG+LQCVL+ LCQTY AL LST
Sbjct: 126 RIYEGTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLST 185
Query: 679 ESSVVLYG 702
ESSVVL+G
Sbjct: 186 ESSVVLFG 193
>AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-PA
protein.
Length = 558
Score = 229 bits (561), Expect = 2e-60
Identities = 112/188 (59%), Positives = 139/188 (73%), Gaps = 2/188 (1%)
Frame = +1
Query: 145 VGNLSLSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYVDSKDDT--KDY 318
+ L+L I+TS KPFKTIL+AM HAGKEPFPTIYVD+KD + Y
Sbjct: 6 LAELTLGAIFTSEKKGSDESGDGSESKPFKTILQAMRHAGKEPFPTIYVDTKDPNAAEPY 65
Query: 319 DVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVV 498
+ AAKSQLKKIQK++VRE++K DK + E E+ EKR QNL++A+K+ + EDPSLP A +
Sbjct: 66 EPAAKSQLKKIQKLFVRESHKNADKLQREAEDAEKRQQNLEDARKVKISEDPSLPVARKI 125
Query: 499 KICETTEHRGQRICIRGWVHRLRRQGKSLAFLTLRDGTGYLQCVLHGLLCQTYXALVLST 678
+I E T +R R+ + GWVHRLRRQGKSL F+TLRDGTG+LQCVL+ LCQTY AL LST
Sbjct: 126 RIYEGTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLST 185
Query: 679 ESSVVLYG 702
ESSVVL+G
Sbjct: 186 ESSVVLFG 193
>BT001347-1|AAN71102.1| 620|Drosophila melanogaster AT24465p
protein.
Length = 620
Score = 33.1 bits (72), Expect = 0.38
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 149 PTSGMLKDYSLTITLCKFSLNYFLLK*SIGKIKFTDKHSCK 27
P SG+L+ +S+ CKF L +G F D HSCK
Sbjct: 150 PASGLLQMHSVRDACCKFLLRQLHPSNCLGIRSFADAHSCK 190
>AY060733-1|AAL28281.1| 513|Drosophila melanogaster GH18278p
protein.
Length = 513
Score = 33.1 bits (72), Expect = 0.38
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 149 PTSGMLKDYSLTITLCKFSLNYFLLK*SIGKIKFTDKHSCK 27
P SG+L+ +S+ CKF L +G F D HSCK
Sbjct: 43 PASGLLQMHSVRDACCKFLLRQLHPSNCLGIRSFADAHSCK 83
>AE013599-2779|AAF57630.2| 513|Drosophila melanogaster CG15097-PA,
isoform A protein.
Length = 513
Score = 33.1 bits (72), Expect = 0.38
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 149 PTSGMLKDYSLTITLCKFSLNYFLLK*SIGKIKFTDKHSCK 27
P SG+L+ +S+ CKF L +G F D HSCK
Sbjct: 43 PASGLLQMHSVRDACCKFLLRQLHPSNCLGIRSFADAHSCK 83
>AE013599-2778|AAO41354.1| 617|Drosophila melanogaster CG15097-PB,
isoform B protein.
Length = 617
Score = 33.1 bits (72), Expect = 0.38
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 149 PTSGMLKDYSLTITLCKFSLNYFLLK*SIGKIKFTDKHSCK 27
P SG+L+ +S+ CKF L +G F D HSCK
Sbjct: 147 PASGLLQMHSVRDACCKFLLRQLHPSNCLGIRSFADAHSCK 187
>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p protein.
Length = 1190
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
+ KD +D + ++QL K +K+ ++EN + + K +E +K S + EAKK + +
Sbjct: 886 EQKDKLRDQNKEMRNQLVKKEKM-LKENQEIELEVKKKENEQKKISSDAKEAKKRMEALE 944
Query: 472 PSLPKATVVKIC 507
P K C
Sbjct: 945 AKYPWIPEEKNC 956
>AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p
protein.
Length = 985
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
+ KD +D + ++QL K +K+ ++EN + + K +E +K S + EAKK + +
Sbjct: 681 EQKDKLRDQNKEMRNQLVKKEKM-LKENQEIELEVKKKENEQKKISSDAKEAKKRMEALE 739
Query: 472 PSLPKATVVKIC 507
P K C
Sbjct: 740 AKYPWIPEEKNC 751
>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
Length = 1179
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
+ KD +D + ++QL K +K+ ++EN + + K +E +K S + EAKK + +
Sbjct: 875 EQKDKLRDQNKEMRNQLVKKEKM-LKENQEIELEVKKKENEQKKISSDAKEAKKRMEALE 933
Query: 472 PSLPKATVVKIC 507
P K C
Sbjct: 934 AKYPWIPEEKNC 945
>AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD05563
protein.
Length = 1028
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 YVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQ 465
Y +K+ K + A K LK I +NY++ + +++EEE E++ + + Q
Sbjct: 808 YNSAKERKKHFKEAMKESLKSI------DNYESQESSESEEEEEEEKDLKNKLSVHVTNQ 861
Query: 466 ED-PSLPKATV 495
D P +P+A V
Sbjct: 862 MDIPPMPQAAV 872
>AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA
protein.
Length = 1028
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 YVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQ 465
Y +K+ K + A K LK I +NY++ + +++EEE E++ + + Q
Sbjct: 808 YNSAKERKKHFKEAMKESLKSI------DNYESQESSESEEEEEEEKDLKNKLSVHVTNQ 861
Query: 466 ED-PSLPKATV 495
D P +P+A V
Sbjct: 862 MDIPPMPQAAV 872
>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
protein.
Length = 1179
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
+ KD +D + ++QL K +K+ ++EN + + K +E +K S + EAKK + +
Sbjct: 875 EQKDKLRDQNKEMRNQLVKKEKM-LKENQEIELEVKKKENEQKKISSDAKEAKKRMEALE 933
Query: 472 PSLPKATVVKIC 507
P K C
Sbjct: 934 AKYPWIPEEKNC 945
>AE013599-1738|AAF58362.1| 375|Drosophila melanogaster CG13331-PA,
isoform A protein.
Length = 375
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 313 DYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDE-----AKKILLQEDPS 477
DY+ + + K+ QK +R NY+ + + E++ E + LDE A K+ LQ+ S
Sbjct: 30 DYEPRQRQRWKR-QKTRLRGNYQQSESYEILEQSVEDSVEYLDEYLLLDATKLTLQQQQS 88
Query: 478 LP 483
LP
Sbjct: 89 LP 90
>AE013599-1737|AAM68588.1| 430|Drosophila melanogaster CG13331-PB,
isoform B protein.
Length = 430
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 313 DYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDE-----AKKILLQEDPS 477
DY+ + + K+ QK +R NY+ + + E++ E + LDE A K+ LQ+ S
Sbjct: 85 DYEPRQRQRWKR-QKTRLRGNYQQSESYEILEQSVEDSVEYLDEYLLLDATKLTLQQQQS 143
Query: 478 LP 483
LP
Sbjct: 144 LP 145
>AE014134-3568|AAN11144.1| 439|Drosophila melanogaster CG31703-PA,
isoform A protein.
Length = 439
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLD 441
DS + TK D K+Q +K I V+E Y +E ENT + ++
Sbjct: 44 DSAEQTKSSD-DCKAQTRKDVNIEVKETYSGDSSPNSESENTAQNDPQMN 92
>AE014134-3567|ABI31337.1| 555|Drosophila melanogaster CG31703-PB,
isoform B protein.
Length = 555
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLD 441
DS + TK D K+Q +K I V+E Y +E ENT + ++
Sbjct: 44 DSAEQTKSSD-DCKAQTRKDVNIEVKETYSGDSSPNSESENTAQNDPQMN 92
>AE014134-3564|AAN11142.1| 441|Drosophila melanogaster CG31702-PA
protein.
Length = 441
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLD 441
DS + TK D K+Q +K I V+E Y +E ENT + ++
Sbjct: 44 DSAEQTKSSD-DCKAQTRKDVNIEVKETYSGDSSPNSESENTAQNDPQMN 92
>AY069397-1|AAL39542.1| 669|Drosophila melanogaster LD10094p
protein.
Length = 669
Score = 29.1 bits (62), Expect = 6.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 265 KEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA--KAEEENTEKRSQNL 438
K P P I + D K D + K + + + D+A KA +E +EK+ L
Sbjct: 97 KSPSPVIKKSNNKDAKKEDNSEKDEENS------EDGDEPEDEADEKASDEESEKKKPKL 150
Query: 439 DEAKKILLQEDPSLPKA 489
D KI D S PK+
Sbjct: 151 DAEDKIKDATDESKPKS 167
>AL031863-5|CAA21319.1| 638|Drosophila melanogaster EG:EG0003.6
protein.
Length = 638
Score = 29.1 bits (62), Expect = 6.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 265 KEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA--KAEEENTEKRSQNL 438
K P P I + D K D + K + + + D+A KA +E +EK+ L
Sbjct: 95 KSPSPVIKKSNNKDAKKEDNSEKDEENS------EDGDEPEDEADEKASDEESEKKKPKL 148
Query: 439 DEAKKILLQEDPSLPKA 489
D KI D S PK+
Sbjct: 149 DAEDKIKDATDESKPKS 165
>AJ459408-1|CAD30679.1| 612|Drosophila melanogaster DEK protein
protein.
Length = 612
Score = 29.1 bits (62), Expect = 6.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 265 KEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA--KAEEENTEKRSQNL 438
K P P I + D K D + K + + + D+A KA +E +EK+ L
Sbjct: 91 KSPSPVIKKSNNKDAKKEDNSEKDEENS------EDGDEPEDEADEKASDEESEKKKPKL 144
Query: 439 DEAKKILLQEDPSLPKA 489
D KI D S PK+
Sbjct: 145 DAEDKIKDATDESKPKS 161
>AE013599-2360|AAM70892.1| 669|Drosophila melanogaster CG5935-PB,
isoform B protein.
Length = 669
Score = 29.1 bits (62), Expect = 6.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 265 KEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA--KAEEENTEKRSQNL 438
K P P I + D K D + K + + + D+A KA +E +EK+ L
Sbjct: 97 KSPSPVIKKSNNKDAKKEDNSEKDEENS------EDGDEPEDEADEKASDEESEKKKPKL 150
Query: 439 DEAKKILLQEDPSLPKA 489
D KI D S PK+
Sbjct: 151 DAEDKIKDATDESKPKS 167
>AE013599-2359|AAS64830.2| 612|Drosophila melanogaster CG5935-PD,
isoform D protein.
Length = 612
Score = 29.1 bits (62), Expect = 6.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 265 KEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA--KAEEENTEKRSQNL 438
K P P I + D K D + K + + + D+A KA +E +EK+ L
Sbjct: 91 KSPSPVIKKSNNKDAKKEDNSEKDEENS------EDGDEPEDEADEKASDEESEKKKPKL 144
Query: 439 DEAKKILLQEDPSLPKA 489
D KI D S PK+
Sbjct: 145 DAEDKIKDATDESKPKS 161
>AE013599-2358|AAF57943.2| 663|Drosophila melanogaster CG5935-PA,
isoform A protein.
Length = 663
Score = 29.1 bits (62), Expect = 6.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 265 KEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA--KAEEENTEKRSQNL 438
K P P I + D K D + K + + + D+A KA +E +EK+ L
Sbjct: 91 KSPSPVIKKSNNKDAKKEDNSEKDEENS------EDGDEPEDEADEKASDEESEKKKPKL 144
Query: 439 DEAKKILLQEDPSLPKA 489
D KI D S PK+
Sbjct: 145 DAEDKIKDATDESKPKS 161
>AE013599-2357|AAM70891.1| 667|Drosophila melanogaster CG5935-PC,
isoform C protein.
Length = 667
Score = 29.1 bits (62), Expect = 6.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 265 KEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA--KAEEENTEKRSQNL 438
K P P I + D K D + K + + + D+A KA +E +EK+ L
Sbjct: 95 KSPSPVIKKSNNKDAKKEDNSEKDEENS------EDGDEPEDEADEKASDEESEKKKPKL 148
Query: 439 DEAKKILLQEDPSLPKA 489
D KI D S PK+
Sbjct: 149 DAEDKIKDATDESKPKS 165
>AE014297-327|AAF51973.2| 648|Drosophila melanogaster CG2179-PB,
isoform B protein.
Length = 648
Score = 28.7 bits (61), Expect = 8.1
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 379 KAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQR 534
K + KAKAE+E EK + +E Q+ L KA K E E R ++
Sbjct: 145 KFIAKAKAEDEEREKLKKQQEEELDRERQKQEELKKAEAEKQREREERRKEK 196
>AE014297-326|AAF51972.2| 783|Drosophila melanogaster CG2179-PA,
isoform A protein.
Length = 783
Score = 28.7 bits (61), Expect = 8.1
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 379 KAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQR 534
K + KAKAE+E EK + +E Q+ L KA K E E R ++
Sbjct: 280 KFIAKAKAEDEEREKLKKQQEEELDRERQKQEELKKAEAEKQREREERRKEK 331
>AE014134-3563|AAN11141.1| 222|Drosophila melanogaster CG31700-PA
protein.
Length = 222
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENT 417
DS + TK D K+Q +K I V+E Y +E ENT
Sbjct: 44 DSAEQTKSSD-DCKAQTRKDVNIEVKETYSGDSSPNSESENT 84
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,666,090
Number of Sequences: 53049
Number of extensions: 595117
Number of successful extensions: 2298
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2289
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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