Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16k06
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 139 2e-33
U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 31 0.60
Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical p... 31 1.1
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 30 1.4
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 2.4
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z50016-13|CAO82071.1| 211|Caenorhabditis elegans Hypothetical p... 28 5.6
Z50016-12|CAA90317.3| 192|Caenorhabditis elegans Hypothetical p... 28 5.6
Z35639-2|CAA84694.1| 351|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 28 7.4
AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical ... 28 7.4
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 27 9.8
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 139 bits (336), Expect = 2e-33
Identities = 74/161 (45%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Frame = +1
Query: 223 KPFKTILKAMHHAGKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKA 402
+P T+++AM K + ++ + ++ AAK+ +KK K + E K ++KA
Sbjct: 21 QPLATLVQAML-ISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAE-VKKLEKAGC 78
Query: 403 EEENTEKRSQN-LDEAKKILLQEDPSLPKATVVKICETTEHRGQRICIRGWVHRLRRQGK 579
E+ E+ L+EAKKI D SLP+A V+KI E+ +HR QR+ I+ WVHRLRRQGK
Sbjct: 79 REKEAEEAQHAALEEAKKITFSLDKSLPEAKVIKIGESVQHRDQRVSIKAWVHRLRRQGK 138
Query: 580 SLAFLTLRDGTGYLQCVLHGLLCQTYXALVLSTESSVVLYG 702
SL FL LRDG G+LQCVL+ LCQ+Y A+ LSTE+SV +YG
Sbjct: 139 SLMFLVLRDGYGFLQCVLNDKLCQSYDAVTLSTETSVQVYG 179
>U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical
protein F25F8.1 protein.
Length = 630
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 131 STCRTLETLACPRYIPRIRMAMTIQVMVRKRNH 229
S CR +E +ACPR P+I M+ T + V R H
Sbjct: 404 SNCRKVEVIACPR-DPKIEMSRTRWITVGPRGH 435
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA-KAEEENTEKRSQNLDEAKKILLQE 468
D K D KD K + KK K +E K K K EE+ EK+ + E KK +E
Sbjct: 152 DKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKE 211
Query: 469 D 471
D
Sbjct: 212 D 212
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 292 DSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
D K + K D K + KK +K ++ K +K K EE+ EK+ + ++ KK+ +
Sbjct: 163 DEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEK-KEEEKKEEKKEEKKEDEKKV--EPK 219
Query: 472 PSLPK 486
P PK
Sbjct: 220 PGEPK 224
>Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 620 YSAFYM-VYYVRPTML*SYLRSHLWSCM 700
YS+F + +YY PT L SY+ + WSC+
Sbjct: 637 YSSFQLFMYYAVPTTLLSYIFAFFWSCL 664
>Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 620 YSAFYM-VYYVRPTML*SYLRSHLWSCM 700
YS+F + +YY PT L SY+ + WSC+
Sbjct: 637 YSSFQLFMYYAVPTTLLSYIFAFFWSCL 664
>Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical
protein F28G4.5 protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 620 YSAFYM-VYYVRPTML*SYLRSHLWSCM 700
YS F + +YY PT L SY+ + WSC+
Sbjct: 629 YSTFQLFMYYAVPTTLLSYIFAFFWSCL 656
>U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical
protein C28C12.1 protein.
Length = 200
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 397 KAEEENTEKRSQNLDEAKKILLQEDPSL 480
K +EE TEK+ + E++K +L+ED +L
Sbjct: 160 KTDEEGTEKKEPTMTESRKEMLREDDTL 187
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 298 KDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPS 477
K++ KD + ++ KKI + E DK EE EK+ L ++KK L+ED +
Sbjct: 123 KNEEKDAEAPVENDDKKISE----EGINKTDKT--EEPELEKKKSELSDSKKERLREDDT 176
Query: 478 L 480
L
Sbjct: 177 L 177
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 620 YSAFYM-VYYVRPTML*SYLRSHLWSCM 700
YS+F + +YY PT + SY+ + WSC+
Sbjct: 622 YSSFQIFMYYAVPTTVLSYIFAFFWSCL 649
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 367 RENYKAMDKAKAEEENTEKRSQNLDEAK---KILLQEDPSLPKATVVKICETTEHRGQRI 537
+EN K D+ + ++ ++KRSQNLDE + K LL + L + + + E + + +
Sbjct: 852 QENTKLRDELQEMQKMSKKRSQNLDELENMHKTLLVDHSRLQQLHNLLTRDYDEAKKESM 911
Query: 538 CIRGWVHRLRRQ 573
+R V + RQ
Sbjct: 912 ELRQKVQNIPRQ 923
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 223 KPFKTILKAMHHAGKEPFPTIYVDSKDDTK 312
K F+T LK HHA P Y+ SK D K
Sbjct: 411 KNFETALKTSHHAFNLPEKNEYIPSKFDQK 440
>Z50016-13|CAO82071.1| 211|Caenorhabditis elegans Hypothetical
protein T21C12.4b protein.
Length = 211
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +1
Query: 331 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 510
KS K I K R + ++ ++ EK+ ++ E K + +D +P K E
Sbjct: 141 KSNKKSISKKSDRSKVSKVKRSPKTDKELEKKPSSIYERKDVDGHDDLKVPNMRSRKHSE 200
Query: 511 TTEHRGQRIC 540
+++RG ++C
Sbjct: 201 NSKNRG-KVC 209
>Z50016-12|CAA90317.3| 192|Caenorhabditis elegans Hypothetical
protein T21C12.4a protein.
Length = 192
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +1
Query: 331 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 510
KS K I K R + ++ ++ EK+ ++ E K + +D +P K E
Sbjct: 122 KSNKKSISKKSDRSKVSKVKRSPKTDKELEKKPSSIYERKDVDGHDDLKVPNMRSRKHSE 181
Query: 511 TTEHRGQRIC 540
+++RG ++C
Sbjct: 182 NSKNRG-KVC 190
>Z35639-2|CAA84694.1| 351|Caenorhabditis elegans Hypothetical
protein D2045.5 protein.
Length = 351
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 262 GKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIW 363
G+E F + + K DY VA K Q+ K KIW
Sbjct: 305 GEEMFTALSISEKRAPNDYKVATKMQMAK--KIW 336
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +1
Query: 289 VDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEK-----RSQNLDE-AK 450
++ +DD+++ + S LKK + + N + + ++EN +K ++NLD
Sbjct: 675 IEEEDDSENNETVVPSTLKKRTVVRMEHNAEVFREQDEDDENQDKDTVAPSAENLDSPPS 734
Query: 451 KILLQEDPSLPKAT 492
I L+ S+P A+
Sbjct: 735 DIPLETLSSIPSAS 748
>Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 533 GYASEDGYIVSGAKVNLWHS*PCVMALGTYSAFYM-VYYVRPTML*SYLRSHLWSCM 700
G S YIV ++ W++ + YS F + +YY P + +Y+ + WSC+
Sbjct: 604 GKLSYCAYIVHFFLIS-WYTNISEAPMHYYSTFQVWIYYAVPVTIIAYIFAFFWSCL 659
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 331 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL---DEAKKILLQEDPSLPKATVVK 501
++ ++IQ+I RE+ + +AK E +EKR + ++ +K++ D S KAT +
Sbjct: 12 ENNTQRIQEI--RESIRVKTRAKKVSETSEKRRERFRAREDVQKLIRGAD-SYTKATYEE 68
Query: 502 ICE 510
CE
Sbjct: 69 KCE 71
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 27.9 bits (59), Expect = 7.4
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Frame = +1
Query: 259 AGKEPFPTIYVDSKDDTKDYDVAAK--SQLKKIQKIWVREN-----YKAMDKAKAEEENT 417
+GK TI +D D+ D + AAK S +I+ ++ A++KAK + E
Sbjct: 11 SGKRSLETITIDDSDEETDKEPAAKKPSNYTAWAEIFNKKKTESSAVSAIEKAKKDSEK- 69
Query: 418 EKRSQNLDEA-----KKILLQEDPSLPKATVVKICETTEHRGQRI 537
E++ Q L EA ++ L +P K V + + Q+I
Sbjct: 70 ERQRQKLREAIMERKRREALMNEPKKQKIEPVSTVKLEKSVNQKI 114
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 331 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL---DEAKKILLQEDPSLPKATVVK 501
++ ++IQ+I RE+ + +AK E +EKR + ++ +K++ D S KAT +
Sbjct: 12 ENNTQRIQEI--RESIRVKTRAKKVSETSEKRRERFRAREDVQKLIRGAD-SYTKATYEE 68
Query: 502 ICE 510
CE
Sbjct: 69 KCE 71
>AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical
protein R119.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 415 TEKRSQNLDEAKKILLQEDPSLPKATVVKICETTE 519
T +NLD QED LP+ K+C+ TE
Sbjct: 648 TSVGEENLDPMDYCTCQEDEILPEDPCFKVCDITE 682
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +1
Query: 331 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 510
K+ K ++ + E Y + E+ENT K+ +N KK L E + K +IC
Sbjct: 1489 KNYRKYDERKYESEEYSFEETYDYEQENTNKKQKNQRSQKKSDLVEKTQI-KEFSHRICF 1547
Query: 511 TTEHRGQRICIRGWVHRLRRQGKSLAFLTL 600
+ E + C R + +Q + + F L
Sbjct: 1548 SVEPVAE--CRRRGYEAVEQQQRKVRFTCL 1575
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,387,338
Number of Sequences: 27780
Number of extensions: 311375
Number of successful extensions: 973
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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