Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16k05
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-P...    31   1.2  
BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p pro...    30   2.7  
AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-P...    29   8.1  

>AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-PB,
           isoform B protein.
          Length = 1169

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +2

Query: 110 HQFPKDKKIGRLWLK--AI*REKSTPTKSSRLCRKHFVESD*ENISKYTGVKH*H*YLKK 283
           H FP D  I  +W+K   I  E+   TKS  +C +HF   D      +  +++    LK 
Sbjct: 25  HSFPLDPIIRAIWIKNSRISLERQI-TKSVLVCSRHFRRLD------FNTIRNGKYLLKP 77

Query: 284 GAVPSIFSWNMKPVSE 331
              P++F W     +E
Sbjct: 78  RVFPTVFPWGKMDTAE 93


>BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p
           protein.
          Length = 762

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +2

Query: 101 IGVHQFP-KDKKIGRLWLKAI*REKS-TPTKSSRLCRKHFVESD*ENISKYTGVKH*H*Y 274
           I  H+FP K K + + W +   R     P+K S LC +HF + D  N S           
Sbjct: 20  ISFHRFPFKRKDLLQKWKEFTQRSAQWMPSKWSALCSRHFGDED-FNCSNNRKT------ 72

Query: 275 LKKGAVPSI 301
           LKK AVPSI
Sbjct: 73  LKKNAVPSI 81


>AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-PA
            protein.
          Length = 3781

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 77   CFVPICSEIGVHQFPKDKKIGRLWLKAI*REKSTPTKSS--RLCRKHF 214
            CF    S + ++++PKD    R W  A  R +S    S   ++C+ HF
Sbjct: 2529 CFQAEASGVRLYEYPKDMPTIRKWAAAC-RHRSMQASSHGFKVCQSHF 2575


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,770,607
Number of Sequences: 53049
Number of extensions: 574937
Number of successful extensions: 1289
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)